Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RPL7P48-201ENST00000461513 746 ntBASIC4.27□□□□□ -1.73
PRKNO60260 AK3P4-201ENST00000504283 583 ntBASIC4.27□□□□□ -1.73
PRKNO60260 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.27□□□□□ -1.73
PRKNO60260 AC119751.1-201ENST00000513357 765 ntBASIC4.27□□□□□ -1.73
PRKNO60260 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.27□□□□□ -1.73
PRKNO60260 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.27□□□□□ -1.73
PRKNO60260 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.27□□□□□ -1.73
PRKNO60260 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.27□□□□□ -1.73
PRKNO60260 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRKNO60260 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.27□□□□□ -1.73
PRKNO60260 CYP2C60P-201ENST00000566088 139 ntBASIC4.27□□□□□ -1.73
PRKNO60260 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.27□□□□□ -1.73
PRKNO60260 AC023824.3-201ENST00000569003 562 ntBASIC4.27□□□□□ -1.73
PRKNO60260 MIR548Y-201ENST00000582739 110 ntBASIC4.27□□□□□ -1.73
PRKNO60260 AC100847.1-201ENST00000611316 481 ntBASIC4.27□□□□□ -1.73
PRKNO60260 Z99129.2-201ENST00000619967 314 ntBASIC4.27□□□□□ -1.73
PRKNO60260 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.27□□□□□ -1.73
PRKNO60260 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.27□□□□□ -1.73
PRKNO60260 MTND2P41-201ENST00000637599 773 ntBASIC4.27□□□□□ -1.73
PRKNO60260 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRKNO60260 AC135352.1-201ENST00000506173 1418 ntBASIC4.27□□□□□ -1.73
PRKNO60260 GTF2H2B-203ENST00000508065 1432 ntBASIC4.27□□□□□ -1.73
PRKNO60260 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.27□□□□□ -1.73
PRKNO60260 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.27□□□□□ -1.73
PRKNO60260 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRKNO60260 AL355852.1-201ENST00000454081 1771 ntBASIC4.27□□□□□ -1.73
PRKNO60260 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.26□□□□□ -1.73
PRKNO60260 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 AC073055.1-201ENST00000456901 1621 ntBASIC4.26□□□□□ -1.73
PRKNO60260 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PRKNO60260 RNU6-543P-201ENST00000362576 108 ntBASIC4.26□□□□□ -1.73
PRKNO60260 RNA5SP443-201ENST00000363083 132 ntBASIC4.26□□□□□ -1.73
PRKNO60260 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.26□□□□□ -1.73
PRKNO60260 RPS3AP23-201ENST00000401762 784 ntBASIC4.26□□□□□ -1.73
PRKNO60260 FAR2P2-201ENST00000413041 594 ntBASIC4.26□□□□□ -1.73
PRKNO60260 SNRPFP1-201ENST00000414761 252 ntBASIC4.26□□□□□ -1.73
PRKNO60260 RPL22P18-201ENST00000417197 377 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.26□□□□□ -1.73
PRKNO60260 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.26□□□□□ -1.73
PRKNO60260 KRR1P1-201ENST00000419430 803 ntBASIC4.26□□□□□ -1.73
PRKNO60260 UQCRBP1-201ENST00000421129 336 ntBASIC4.26□□□□□ -1.73
PRKNO60260 RPL36AP10-201ENST00000421785 322 ntBASIC4.26□□□□□ -1.73
PRKNO60260 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.26□□□□□ -1.73
PRKNO60260 FAR2P4-202ENST00000425399 584 ntBASIC4.26□□□□□ -1.73
PRKNO60260 RPS12P10-201ENST00000427031 377 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.26□□□□□ -1.73
PRKNO60260 YWHAEP5-201ENST00000431545 765 ntBASIC4.26□□□□□ -1.73
PRKNO60260 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.26□□□□□ -1.73
PRKNO60260 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.26□□□□□ -1.73
PRKNO60260 MTCO2P20-201ENST00000437339 673 ntBASIC4.26□□□□□ -1.73
PRKNO60260 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.26□□□□□ -1.73
PRKNO60260 AL589765.3-201ENST00000446084 462 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AL050341.1-201ENST00000447743 313 ntBASIC4.26□□□□□ -1.73
PRKNO60260 TPT1P13-201ENST00000449760 499 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.26□□□□□ -1.73
PRKNO60260 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.26□□□□□ -1.73
PRKNO60260 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.26□□□□□ -1.73
PRKNO60260 RNU7-140P-201ENST00000459546 60 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.26□□□□□ -1.73
PRKNO60260 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PRKNO60260 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.26□□□□□ -1.73
PRKNO60260 AC020890.1-201ENST00000491837 504 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AC093890.1-201ENST00000502554 540 ntBASIC4.26□□□□□ -1.73
PRKNO60260 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PRKNO60260 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.26□□□□□ -1.73
PRKNO60260 UBTFL10-201ENST00000528532 562 ntBASIC4.26□□□□□ -1.73
PRKNO60260 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.26□□□□□ -1.73
PRKNO60260 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
PRKNO60260 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.26□□□□□ -1.73
PRKNO60260 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.26□□□□□ -1.73
PRKNO60260 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.26□□□□□ -1.73
PRKNO60260 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.26□□□□□ -1.73
PRKNO60260 AC009097.3-201ENST00000563557 1018 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AL390726.5-202ENST00000564800 256 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 AC015912.2-201ENST00000571053 181 ntBASIC4.26□□□□□ -1.73
PRKNO60260 MIR4715-201ENST00000584117 79 ntBASIC4.26□□□□□ -1.73
PRKNO60260 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 AC008751.2-201ENST00000597885 980 ntBASIC4.26□□□□□ -1.73
PRKNO60260 RPL12P25-202ENST00000598100 674 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.26□□□□□ -1.73
PRKNO60260 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.26□□□□□ -1.73
PRKNO60260 AC093765.1-201ENST00000603758 881 ntBASIC4.26□□□□□ -1.73
PRKNO60260 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRKNO60260 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.26□□□□□ -1.73
PRKNO60260 AC021755.4-201ENST00000616620 456 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AC010975.3-201ENST00000618727 978 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AC013470.4-201ENST00000619978 986 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AC007342.8-201ENST00000623278 678 ntBASIC4.26□□□□□ -1.73
PRKNO60260 AL049536.1-201ENST00000625043 744 ntBASIC4.26□□□□□ -1.73
PRKNO60260 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.26□□□□□ -1.73
PRKNO60260 AL121594.5-201ENST00000631724 573 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms