Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.69□□□□□ -1.66
LDB2O43679 TAF13P2-201ENST00000416876 286 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AL356320.2-201ENST00000417263 507 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.69□□□□□ -1.66
LDB2O43679 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.69□□□□□ -1.66
LDB2O43679 C1DP1-201ENST00000426049 402 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.69□□□□□ -1.66
LDB2O43679 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.69□□□□□ -1.66
LDB2O43679 NANOGP2-201ENST00000435391 727 ntBASIC4.69□□□□□ -1.66
LDB2O43679 H2AFZP6-201ENST00000444403 394 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.69□□□□□ -1.66
LDB2O43679 Z99714.1-201ENST00000450463 807 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.69□□□□□ -1.66
LDB2O43679 CDC42P1-201ENST00000456658 548 ntBASIC4.69□□□□□ -1.66
LDB2O43679 RNU7-140P-201ENST00000459546 60 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC090142.1-201ENST00000465776 462 ntBASIC4.69□□□□□ -1.66
LDB2O43679 RN7SL738P-201ENST00000470264 297 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC006463.2-201ENST00000473326 348 ntBASIC4.69□□□□□ -1.66
LDB2O43679 RPL23AP44-201ENST00000482216 473 ntBASIC4.69□□□□□ -1.66
LDB2O43679 HPRT1P2-201ENST00000505250 544 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.69□□□□□ -1.66
LDB2O43679 AC034244.1-201ENST00000507687 207 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.69□□□□□ -1.66
LDB2O43679 AC092593.2-201ENST00000513866 913 ntBASIC4.69□□□□□ -1.66
LDB2O43679 PRELID3BP4-201ENST00000515476 571 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.69□□□□□ -1.66
LDB2O43679 AC018442.3-201ENST00000523025 183 ntBASIC4.69□□□□□ -1.66
LDB2O43679 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LDB2O43679 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.69□□□□□ -1.66
LDB2O43679 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.69□□□□□ -1.66
LDB2O43679 ZNF321P-202ENST00000550843 495 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AL110118.1-201ENST00000553543 400 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AL390334.1-201ENST00000556395 450 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC023813.2-201ENST00000564321 469 ntBASIC4.69□□□□□ -1.66
LDB2O43679 CYP2C60P-201ENST00000566088 139 ntBASIC4.69□□□□□ -1.66
LDB2O43679 UBE2FP2-201ENST00000566646 462 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.69□□□□□ -1.66
LDB2O43679 RN7SL652P-201ENST00000577769 300 ntBASIC4.69□□□□□ -1.66
LDB2O43679 MIR4330-201ENST00000579077 105 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC209154.1-201ENST00000582156 337 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC069366.1-201ENST00000583159 838 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LDB2O43679 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.69□□□□□ -1.66
LDB2O43679 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 AC009948.4-201ENST00000604692 675 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.69□□□□□ -1.66
LDB2O43679 AC009237.15-201ENST00000610252 501 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AL161616.1-201ENST00000611867 286 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.69□□□□□ -1.66
LDB2O43679 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LDB2O43679 AC078883.4-201ENST00000623218 367 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC109454.4-201ENST00000623411 649 ntBASIC4.69□□□□□ -1.66
LDB2O43679 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 AP003399.1-201ENST00000637534 361 ntBASIC4.69□□□□□ -1.66
LDB2O43679 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 RBPJP2-201ENST00000618187 1444 ntBASIC4.69□□□□□ -1.66
LDB2O43679 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDB2O43679 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LDB2O43679 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LDB2O43679 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDB2O43679 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDB2O43679 SDAD1P1-202ENST00000524156 2051 ntBASIC4.68□□□□□ -1.66
LDB2O43679 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDB2O43679 OR56B2P-201ENST00000317102 954 ntBASIC4.68□□□□□ -1.66
LDB2O43679 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LDB2O43679 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LDB2O43679 RNU1-87P-201ENST00000363727 170 ntBASIC4.68□□□□□ -1.66
LDB2O43679 RNU6-353P-201ENST00000364266 108 ntBASIC4.68□□□□□ -1.66
LDB2O43679 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LDB2O43679 RNA5SP87-201ENST00000384155 118 ntBASIC4.68□□□□□ -1.66
LDB2O43679 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.68□□□□□ -1.66
LDB2O43679 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.68□□□□□ -1.66
LDB2O43679 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.68□□□□□ -1.66
LDB2O43679 Z75741.2-201ENST00000417272 1167 ntBASIC4.68□□□□□ -1.66
LDB2O43679 AC140479.3-201ENST00000418944 1126 ntBASIC4.68□□□□□ -1.66
LDB2O43679 HIGD1AP12-201ENST00000427832 281 ntBASIC4.68□□□□□ -1.66
LDB2O43679 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.68□□□□□ -1.66
LDB2O43679 CACYBPP1-201ENST00000438592 684 ntBASIC4.68□□□□□ -1.66
LDB2O43679 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.68□□□□□ -1.66
LDB2O43679 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.68□□□□□ -1.66
LDB2O43679 RPL36AP15-201ENST00000444514 266 ntBASIC4.68□□□□□ -1.66
LDB2O43679 H2AFZP5-201ENST00000446960 382 ntBASIC4.68□□□□□ -1.66
LDB2O43679 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.68□□□□□ -1.66
LDB2O43679 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LDB2O43679 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.68□□□□□ -1.66
LDB2O43679 RPL5P22-201ENST00000480199 884 ntBASIC4.68□□□□□ -1.66
LDB2O43679 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LDB2O43679 IGLV2-34-201ENST00000490007 283 ntBASIC4.68□□□□□ -1.66
LDB2O43679 AC008897.1-201ENST00000494006 347 ntBASIC4.68□□□□□ -1.66
LDB2O43679 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.68□□□□□ -1.66
LDB2O43679 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.68□□□□□ -1.66
LDB2O43679 RN7SKP46-201ENST00000515942 234 ntBASIC4.68□□□□□ -1.66
LDB2O43679 RNU2-30P-201ENST00000516209 141 ntBASIC4.68□□□□□ -1.66
LDB2O43679 AC007834.2-201ENST00000536310 343 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms