Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RPL23AP81-201ENST00000455252 467 ntBASIC3.74□□□□□ -1.81
SGCEO43556 RPS29P33-201ENST00000456717 146 ntBASIC3.74□□□□□ -1.81
SGCEO43556 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.74□□□□□ -1.81
SGCEO43556 AC079804.1-201ENST00000461922 436 ntBASIC3.74□□□□□ -1.81
SGCEO43556 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.74□□□□□ -1.81
SGCEO43556 AC013356.1-201ENST00000489027 564 ntBASIC3.74□□□□□ -1.81
SGCEO43556 AC104164.2-201ENST00000496953 495 ntBASIC3.74□□□□□ -1.81
SGCEO43556 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.74□□□□□ -1.81
SGCEO43556 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SGCEO43556 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.74□□□□□ -1.81
SGCEO43556 CDH12P4-201ENST00000517835 295 ntBASIC3.74□□□□□ -1.81
SGCEO43556 CDH12P3-201ENST00000517935 295 ntBASIC3.74□□□□□ -1.81
SGCEO43556 CDH12P1-201ENST00000518435 295 ntBASIC3.74□□□□□ -1.81
SGCEO43556 AC010476.1-201ENST00000519111 851 ntBASIC3.74□□□□□ -1.81
SGCEO43556 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.74□□□□□ -1.81
SGCEO43556 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.74□□□□□ -1.81
SGCEO43556 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.74□□□□□ -1.81
SGCEO43556 OR8G5-201ENST00000524943 1041 ntBASIC3.74□□□□□ -1.81
SGCEO43556 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SGCEO43556 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.74□□□□□ -1.81
SGCEO43556 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.74□□□□□ -1.81
SGCEO43556 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
SGCEO43556 NPM1P47-201ENST00000560843 856 ntBASIC3.74□□□□□ -1.81
SGCEO43556 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.74□□□□□ -1.81
SGCEO43556 SS18L2P2-201ENST00000583960 235 ntBASIC3.74□□□□□ -1.81
SGCEO43556 AC011477.5-201ENST00000586571 259 ntBASIC3.74□□□□□ -1.81
SGCEO43556 RPL23AP61-201ENST00000623642 466 ntBASIC3.74□□□□□ -1.81
SGCEO43556 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SGCEO43556 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SGCEO43556 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SGCEO43556 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.74□□□□□ -1.81
SGCEO43556 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SGCEO43556 AC053481.2-202ENST00000582394 1500 ntBASIC3.74□□□□□ -1.81
SGCEO43556 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SGCEO43556 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
SGCEO43556 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.73□□□□□ -1.81
SGCEO43556 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.73□□□□□ -1.81
SGCEO43556 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SGCEO43556 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SGCEO43556 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SGCEO43556 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.73□□□□□ -1.81
SGCEO43556 AC139713.2-214ENST00000642059 1811 ntBASIC3.73□□□□□ -1.81
SGCEO43556 RNU6-666P-201ENST00000363499 107 ntBASIC3.73□□□□□ -1.81
SGCEO43556 RNU1-89P-201ENST00000384592 164 ntBASIC3.73□□□□□ -1.81
SGCEO43556 ELOCP19-201ENST00000411919 318 ntBASIC3.73□□□□□ -1.81
SGCEO43556 RPL26P29-201ENST00000415623 438 ntBASIC3.73□□□□□ -1.81
SGCEO43556 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.73□□□□□ -1.81
SGCEO43556 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.73□□□□□ -1.81
SGCEO43556 BTF3P9-201ENST00000418784 283 ntBASIC3.73□□□□□ -1.81
SGCEO43556 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.73□□□□□ -1.81
SGCEO43556 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.73□□□□□ -1.81
SGCEO43556 AC007064.3-201ENST00000422608 359 ntBASIC3.73□□□□□ -1.81
SGCEO43556 AC009480.2-201ENST00000422916 432 ntBASIC3.73□□□□□ -1.81
SGCEO43556 RPL30P3-201ENST00000424262 333 ntBASIC3.73□□□□□ -1.81
SGCEO43556 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.73□□□□□ -1.81
SGCEO43556 DNAJC19P7-201ENST00000428811 344 ntBASIC3.73□□□□□ -1.81
SGCEO43556 AC068287.1-201ENST00000430283 295 ntBASIC3.73□□□□□ -1.81
SGCEO43556 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.73□□□□□ -1.81
SGCEO43556 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.73□□□□□ -1.81
SGCEO43556 ELOCP8-201ENST00000439309 332 ntBASIC3.73□□□□□ -1.81
SGCEO43556 ELOCP15-201ENST00000442090 332 ntBASIC3.73□□□□□ -1.81
SGCEO43556 RPL5P32-201ENST00000454085 879 ntBASIC3.73□□□□□ -1.81
SGCEO43556 RPS20P4-201ENST00000461659 355 ntBASIC3.73□□□□□ -1.81
SGCEO43556 RPL5P13-201ENST00000462840 709 ntBASIC3.73□□□□□ -1.81
SGCEO43556 RPL23AP12-201ENST00000467573 473 ntBASIC3.73□□□□□ -1.81
SGCEO43556 AC104629.2-201ENST00000468627 598 ntBASIC3.73□□□□□ -1.81
SGCEO43556 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.73□□□□□ -1.81
SGCEO43556 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.73□□□□□ -1.81
SGCEO43556 KCTD9P2-201ENST00000512203 1013 ntBASIC3.73□□□□□ -1.81
SGCEO43556 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.73□□□□□ -1.81
SGCEO43556 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.73□□□□□ -1.81
SGCEO43556 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.73□□□□□ -1.81
SGCEO43556 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.73□□□□□ -1.81
SGCEO43556 UBTFL9-201ENST00000534504 1148 ntBASIC3.73□□□□□ -1.81
SGCEO43556 CR383656.6-201ENST00000550518 394 ntBASIC3.73□□□□□ -1.81
SGCEO43556 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.73□□□□□ -1.81
SGCEO43556 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.73□□□□□ -1.81
SGCEO43556 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SGCEO43556 AL161713.1-201ENST00000555538 145 ntBASIC3.73□□□□□ -1.81
SGCEO43556 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.73□□□□□ -1.81
SGCEO43556 AC117490.2-201ENST00000610042 594 ntBASIC3.73□□□□□ -1.81
SGCEO43556 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SGCEO43556 MIR6820-201ENST00000611508 62 ntBASIC3.73□□□□□ -1.81
SGCEO43556 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.73□□□□□ -1.81
SGCEO43556 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SGCEO43556 AC097504.1-201ENST00000515103 2415 ntBASIC3.73□□□□□ -1.81
SGCEO43556 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SGCEO43556 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SGCEO43556 AC087565.3-202ENST00000642085 1603 ntBASIC3.73□□□□□ -1.81
SGCEO43556 EXOC5P1-201ENST00000510543 1969 ntBASIC3.72□□□□□ -1.81
SGCEO43556 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SGCEO43556 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.72□□□□□ -1.81
SGCEO43556 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
SGCEO43556 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SGCEO43556 MFSD8-220ENST00000641243 1422 ntBASIC3.72□□□□□ -1.81
SGCEO43556 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SGCEO43556 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
SGCEO43556 AL583835.1-201ENST00000399570 407 ntBASIC3.72□□□□□ -1.81
SGCEO43556 RNA5SP36-201ENST00000410197 133 ntBASIC3.72□□□□□ -1.81
SGCEO43556 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms