Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.91□□□□□ -1.62
MSI1O43347 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.91□□□□□ -1.62
MSI1O43347 LINC02211-204ENST00000642024 1070 ntBASIC4.91□□□□□ -1.62
MSI1O43347 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
MSI1O43347 AC012618.3-205ENST00000637896 1496 ntBASIC4.91□□□□□ -1.62
MSI1O43347 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
MSI1O43347 MTCO1P15-201ENST00000529569 1526 ntBASIC4.91□□□□□ -1.62
MSI1O43347 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
MSI1O43347 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.91□□□□□ -1.62
MSI1O43347 AP001273.1-201ENST00000624493 3152 ntBASIC4.91□□□□□ -1.62
MSI1O43347 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
MSI1O43347 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
MSI1O43347 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
MSI1O43347 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
MSI1O43347 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.9□□□□□ -1.62
MSI1O43347 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
MSI1O43347 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
MSI1O43347 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
MSI1O43347 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.9□□□□□ -1.62
MSI1O43347 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
MSI1O43347 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
MSI1O43347 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MSI1O43347 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MSI1O43347 AL590762.2-201ENST00000395798 571 ntBASIC4.9□□□□□ -1.63
MSI1O43347 TMBIM7P-201ENST00000418074 855 ntBASIC4.9□□□□□ -1.63
MSI1O43347 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.9□□□□□ -1.63
MSI1O43347 EIF4HP2-201ENST00000424380 563 ntBASIC4.9□□□□□ -1.63
MSI1O43347 HIGD1AP4-201ENST00000430194 280 ntBASIC4.9□□□□□ -1.63
MSI1O43347 RPS6P15-201ENST00000431996 751 ntBASIC4.9□□□□□ -1.63
MSI1O43347 MTND2P22-201ENST00000444325 1033 ntBASIC4.9□□□□□ -1.63
MSI1O43347 SETD6P1-201ENST00000444575 317 ntBASIC4.9□□□□□ -1.63
MSI1O43347 Z83846.1-201ENST00000446798 265 ntBASIC4.9□□□□□ -1.63
MSI1O43347 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MSI1O43347 AC005002.1-201ENST00000447458 540 ntBASIC4.9□□□□□ -1.63
MSI1O43347 RHEBP2-201ENST00000450289 600 ntBASIC4.9□□□□□ -1.63
MSI1O43347 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.9□□□□□ -1.63
MSI1O43347 AC010326.1-201ENST00000462726 602 ntBASIC4.9□□□□□ -1.63
MSI1O43347 RPS29P22-201ENST00000472363 168 ntBASIC4.9□□□□□ -1.63
MSI1O43347 RPL23AP44-201ENST00000482216 473 ntBASIC4.9□□□□□ -1.63
MSI1O43347 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MSI1O43347 CEACAMP10-202ENST00000495431 496 ntBASIC4.9□□□□□ -1.63
MSI1O43347 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.9□□□□□ -1.63
MSI1O43347 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.9□□□□□ -1.63
MSI1O43347 HMGB1P1-201ENST00000522557 636 ntBASIC4.9□□□□□ -1.63
MSI1O43347 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.9□□□□□ -1.63
MSI1O43347 ZNF321P-202ENST00000550843 495 ntBASIC4.9□□□□□ -1.63
MSI1O43347 AL132657.2-201ENST00000564417 358 ntBASIC4.9□□□□□ -1.63
MSI1O43347 RN7SL652P-201ENST00000577769 300 ntBASIC4.9□□□□□ -1.63
MSI1O43347 MIR4330-201ENST00000579077 105 ntBASIC4.9□□□□□ -1.63
MSI1O43347 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.9□□□□□ -1.63
MSI1O43347 AC021171.1-201ENST00000603137 706 ntBASIC4.9□□□□□ -1.63
MSI1O43347 AL392112.1-201ENST00000605115 829 ntBASIC4.9□□□□□ -1.63
MSI1O43347 U6.48-201ENST00000618523 106 ntBASIC4.9□□□□□ -1.63
MSI1O43347 AC017037.3-201ENST00000625016 472 ntBASIC4.9□□□□□ -1.63
MSI1O43347 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MSI1O43347 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
MSI1O43347 AL034370.1-201ENST00000397254 1590 ntBASIC4.9□□□□□ -1.63
MSI1O43347 Z95327.2-201ENST00000414579 1873 ntBASIC4.9□□□□□ -1.63
MSI1O43347 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
MSI1O43347 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
MSI1O43347 AL136164.3-201ENST00000624429 3978 ntBASIC4.89□□□□□ -1.63
MSI1O43347 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
MSI1O43347 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
MSI1O43347 MFSD8-216ENST00000641147 4009 ntBASIC4.89□□□□□ -1.63
MSI1O43347 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MSI1O43347 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.89□□□□□ -1.63
MSI1O43347 PROS2P-201ENST00000474651 1951 ntBASIC4.89□□□□□ -1.63
MSI1O43347 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MSI1O43347 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MSI1O43347 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MSI1O43347 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
MSI1O43347 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MSI1O43347 AC079741.1-201ENST00000321498 212 ntBASIC4.89□□□□□ -1.63
MSI1O43347 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MSI1O43347 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.89□□□□□ -1.63
MSI1O43347 RNU4-44P-201ENST00000363050 141 ntBASIC4.89□□□□□ -1.63
MSI1O43347 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.89□□□□□ -1.63
MSI1O43347 AL049545.1-201ENST00000401856 572 ntBASIC4.89□□□□□ -1.63
MSI1O43347 RPS16P5-201ENST00000406501 404 ntBASIC4.89□□□□□ -1.63
MSI1O43347 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.89□□□□□ -1.63
MSI1O43347 ELOCP9-201ENST00000418624 239 ntBASIC4.89□□□□□ -1.63
MSI1O43347 AC140479.3-201ENST00000418944 1126 ntBASIC4.89□□□□□ -1.63
MSI1O43347 AL358176.3-201ENST00000420757 454 ntBASIC4.89□□□□□ -1.63
MSI1O43347 RPL36AP10-201ENST00000421785 322 ntBASIC4.89□□□□□ -1.63
MSI1O43347 RPL7P57-201ENST00000423238 740 ntBASIC4.89□□□□□ -1.63
MSI1O43347 CKS1BP6-201ENST00000424932 240 ntBASIC4.89□□□□□ -1.63
MSI1O43347 MOB1AP1-201ENST00000430903 535 ntBASIC4.89□□□□□ -1.63
MSI1O43347 AC004938.1-201ENST00000438468 308 ntBASIC4.89□□□□□ -1.63
MSI1O43347 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.89□□□□□ -1.63
MSI1O43347 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.89□□□□□ -1.63
MSI1O43347 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.89□□□□□ -1.63
MSI1O43347 AC108463.1-201ENST00000450258 347 ntBASIC4.89□□□□□ -1.63
MSI1O43347 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.89□□□□□ -1.63
MSI1O43347 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.89□□□□□ -1.63
MSI1O43347 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.89□□□□□ -1.63
MSI1O43347 USP9YP25-201ENST00000457708 443 ntBASIC4.89□□□□□ -1.63
MSI1O43347 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.89□□□□□ -1.63
MSI1O43347 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.89□□□□□ -1.63
MSI1O43347 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.89□□□□□ -1.63
MSI1O43347 ARL4AP1-201ENST00000503220 705 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms