Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
SLC28A1O00337 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC28A1O00337 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SLC28A1O00337 MIR448-201ENST00000362131 111 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 RNA5SP27-201ENST00000363839 119 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 SNORD113.2-201ENST00000364166 89 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 RNA5SP87-201ENST00000384155 118 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.22□□□□□ -1.73
SLC28A1O00337 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC28A1O00337 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC28A1O00337 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC28A1O00337 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC28A1O00337 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC28A1O00337 CEACAMP1-201ENST00000434624 1035 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC28A1O00337 RPL7P33-201ENST00000444159 742 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 RPL6P5-201ENST00000445678 828 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 AC068135.1-201ENST00000446164 246 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC28A1O00337 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC28A1O00337 AL035407.2-201ENST00000454090 378 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC28A1O00337 RPL5P30-201ENST00000465511 891 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 RPL12P20-201ENST00000475538 479 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 RPL30P11-201ENST00000495304 339 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 AL035404.1-201ENST00000497982 568 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.22□□□□□ -1.73
SLC28A1O00337 AC112518.2-201ENST00000508565 425 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 ATP1B1P1-201ENST00000509767 915 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.22□□□□□ -1.73
SLC28A1O00337 AC008562.1-201ENST00000521763 330 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC28A1O00337 PDCD5P1-201ENST00000543528 309 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC28A1O00337 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC28A1O00337 AC093510.2-201ENST00000562820 896 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC28A1O00337 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC28A1O00337 HNRNPCP4-201ENST00000571636 900 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC28A1O00337 AC069061.3-201ENST00000582254 823 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC28A1O00337 AC245100.7-201ENST00000609678 442 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 MIR8084-201ENST00000614105 89 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 AC024595.1-201ENST00000623088 387 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
SLC28A1O00337 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SLC28A1O00337 Z98755.1-201ENST00000407015 1384 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.22□□□□□ -1.73
SLC28A1O00337 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC28A1O00337 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC28A1O00337 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC28A1O00337 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC28A1O00337 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC28A1O00337 AC011266.1-201ENST00000624119 3569 ntBASIC4.22□□□□□ -1.73
SLC28A1O00337 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC28A1O00337 MFSD8-213ENST00000641134 1327 ntBASIC4.21□□□□□ -1.73
SLC28A1O00337 AL049737.1-201ENST00000413920 1403 ntBASIC4.21□□□□□ -1.73
SLC28A1O00337 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
SLC28A1O00337 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SLC28A1O00337 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
SLC28A1O00337 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SLC28A1O00337 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC28A1O00337 SEC63P2-201ENST00000503863 1939 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SLC28A1O00337 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SLC28A1O00337 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SLC28A1O00337 AL592437.2-201ENST00000421655 2434 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC28A1O00337 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC28A1O00337 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
SLC28A1O00337 RNA5SP52-201ENST00000362448 134 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 RNU6-543P-201ENST00000362576 108 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 SNORD56.4-201ENST00000363883 71 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 OR52E6-202ENST00000379946 954 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 AL035419.1-201ENST00000397037 564 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 AC008173.1-201ENST00000418901 264 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC28A1O00337 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.21□□□□□ -1.74
SLC28A1O00337 AC073310.1-201ENST00000423226 1033 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC28A1O00337 AL359265.2-201ENST00000434367 631 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 RPS7P5-201ENST00000441482 581 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 RPL36AP15-201ENST00000444514 266 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 AC053481.1-201ENST00000467217 306 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.21□□□□□ -1.74
SLC28A1O00337 RPL21P47-201ENST00000483696 477 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC28A1O00337 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC28A1O00337 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC28A1O00337 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC28A1O00337 HMGB1P23-201ENST00000518743 568 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.21□□□□□ -1.74
SLC28A1O00337 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC28A1O00337 AC069240.1-201ENST00000548774 375 ntBASIC4.21□□□□□ -1.74
SLC28A1O00337 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC28A1O00337 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.21□□□□□ -1.74
SLC28A1O00337 AC016180.1-201ENST00000567945 403 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms