Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AL049780.3-201ENST00000624612 1583 ntBASIC5.46□□□□□ -1.53
SHISA3A0PJX4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SHISA3A0PJX4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.46□□□□□ -1.53
SHISA3A0PJX4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.46□□□□□ -1.53
SHISA3A0PJX4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 OR5J1P-201ENST00000313544 939 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 SNORD35A-201ENST00000363389 86 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 SNORA69-201ENST00000383895 132 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AL078604.1-201ENST00000404609 466 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 RPL12P23-201ENST00000405880 490 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 RN7SKP281-201ENST00000410472 352 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 RPL35AP24-201ENST00000413846 330 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 ELOCP4-201ENST00000420090 333 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 NCOR1P3-201ENST00000420479 303 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 RPS19P6-201ENST00000441327 433 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 FAM103A2P-201ENST00000444122 354 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 NIPA2P5-201ENST00000452282 464 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 RPL36AP55-201ENST00000454114 305 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 VPS25P1-201ENST00000455691 508 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC025271.1-201ENST00000485045 429 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 RN7SL776P-201ENST00000493390 268 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC090453.1-201ENST00000495560 436 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 SNORA40.12-201ENST00000516329 111 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 PDCD5P1-201ENST00000543528 309 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC079075.1-201ENST00000559543 878 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC009117.1-201ENST00000563948 554 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 MIR378C-201ENST00000578683 81 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 BBIP1P1-201ENST00000602999 279 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC073046.2-201ENST00000604756 527 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AL078624.2-201ENST00000605063 554 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 OR10AB1P-201ENST00000609613 938 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC006924.1-201ENST00000610750 559 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 uc_338.5-201ENST00000611839 155 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AL355974.3-201ENST00000617383 467 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC009237.17-201ENST00000618111 748 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 AC140479.4-205ENST00000636339 820 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.46□□□□□ -1.54
SHISA3A0PJX4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
SHISA3A0PJX4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 NUP58P1-201ENST00000502546 1738 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 MTCO1P11-201ENST00000429111 1528 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 HSPA8P18-201ENST00000439846 1928 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 RNU5E-1-201ENST00000362477 120 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 RNA5SP152-201ENST00000365184 110 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 U3.52-201ENST00000384034 216 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 RNU6-921P-201ENST00000384361 107 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 SOD1P1-201ENST00000407803 440 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 SNORA11D-201ENST00000408548 128 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 SNORA11E-201ENST00000408778 128 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 RN7SKP29-201ENST00000410957 272 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.45□□□□□ -1.54
SHISA3A0PJX4 MTCO2P5-201ENST00000422621 426 ntBASIC5.45□□□□□ -1.54
SHISA3A0PJX4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms