Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 AC093765.1-201ENST00000603758 881 ntBASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 AC019322.2-201ENST00000605634 147 ntBASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 AP001521.2-201ENST00000608772 546 ntBASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 AC121761.2-201ENST00000617300 689 ntBASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 AC110801.1-201ENST00000623590 212 ntBASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 AC124312.6-202ENST00000623624 418 ntBASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 AP003072.4-201ENST00000624580 310 ntBASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 LRRC77P-213ENST00000637727 880 ntBASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC1.99□□□□□ -2.09
LINC01558Q9Y6Z2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 RN7SKP250-201ENST00000363924 321 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 MIR3065-201ENST00000390137 79 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 SNORA26.7-201ENST00000391288 122 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 RPL21P3-201ENST00000395517 478 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 OR4C10P-201ENST00000434991 931 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 CACYBPP1-201ENST00000438592 684 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC239800.1-201ENST00000442049 719 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 MTCYBP21-201ENST00000443300 1113 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AL590648.3-201ENST00000446962 473 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 NDUFA5P8-201ENST00000449019 346 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 PPIAP3-201ENST00000450588 505 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AL590639.1-201ENST00000456484 337 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 RPL21P11-201ENST00000461458 483 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC009127.1-201ENST00000467090 155 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 RPS29P19-201ENST00000479709 171 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 RN7SL655P-201ENST00000486087 298 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 HMGN2P25-201ENST00000486956 268 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 RBBP4P1-201ENST00000502424 1276 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 Y_RNA.667-201ENST00000516212 107 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 SOX5P1-201ENST00000524155 1127 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 OR4A46P-201ENST00000527255 933 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC002519.2-203ENST00000567043 837 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AL078601.3-201ENST00000573303 535 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 MIR4474-201ENST00000579189 78 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC006116.7-201ENST00000590141 756 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 BNIP3P38-201ENST00000601117 544 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AL451044.1-201ENST00000604867 238 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC034236.3-201ENST00000605999 461 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC105429.2-201ENST00000610567 517 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC131902.3-201ENST00000611767 581 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AC084035.1-201ENST00000634543 607 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AL392088.2-201ENST00000637607 285 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 NMD3P1-201ENST00000439704 1488 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AL356274.2-201ENST00000624379 3752 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 AL157700.1-201ENST00000561973 1432 ntBASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LINC01558Q9Y6Z2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.97□□□□□ -2.09
LINC01558Q9Y6Z2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LINC01558Q9Y6Z2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LINC01558Q9Y6Z2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms