Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 MIR133B-201ENST00000362210 119 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RNU6-249P-201ENST00000363016 102 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RNU5D-1-201ENST00000363299 116 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RN7SKP153-201ENST00000365026 316 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RNU1-43P-201ENST00000365052 165 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 SNORA16A-201ENST00000384342 137 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AL109941.1-201ENST00000401925 229 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AL031577.2-201ENST00000404133 280 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RPS15AP38-201ENST00000413110 372 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 BTF3L4P1-201ENST00000413813 468 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 HSPD1P12-201ENST00000429127 1069 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RPL31P54-201ENST00000429803 370 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC124944.2-201ENST00000429866 1242 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RPL19P16-201ENST00000433839 588 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 ACTR3P2-201ENST00000439585 1257 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RPS11P7-201ENST00000442125 465 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC073850.1-201ENST00000449243 255 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RPL12P26-201ENST00000452430 487 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AL354710.1-201ENST00000453641 246 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC079168.1-201ENST00000458741 345 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC092045.1-201ENST00000495716 1231 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC147055.4-201ENST00000504399 745 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 MTND5P13-201ENST00000513046 1079 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RN7SKP31-201ENST00000516354 278 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AP000676.2-201ENST00000529711 301 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC023161.2-201ENST00000551218 780 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 ACTR3BP3-201ENST00000565577 979 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 MIR3915-201ENST00000578518 97 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RN7SL290P-201ENST00000578661 300 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC006116.3-201ENST00000592968 361 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC091488.1-201ENST00000604239 660 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 TAS2R6P-201ENST00000605022 826 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC009163.6-201ENST00000612367 342 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AC007494.3-201ENST00000624660 743 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AP001029.2-203ENST00000589795 4910 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 AL078621.3-201ENST00000623707 2042 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 TRIM51GP-201ENST00000534741 1350 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC009313.2-201ENST00000417893 1941 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC011477.1-204ENST00000623416 1325 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 RNA5SP305-201ENST00000362665 119 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 RNU6-582P-201ENST00000362989 107 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 RNU6-492P-201ENST00000363035 104 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 RNU4-24P-201ENST00000364565 139 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 SUGT1P1-201ENST00000379514 476 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 SNORD116-23-201ENST00000384645 92 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 RNU6-1151P-201ENST00000384684 107 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 RNU6-253P-201ENST00000384730 105 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AL139098.1-201ENST00000407291 389 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC079809.1-201ENST00000415468 276 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB1Q9Y5F3 AC096638.2-201ENST00000434965 711 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms