Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC073111.2-201ENST00000605657 1075 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AP003392.5-201ENST00000607857 415 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AL158163.1-201ENST00000603915 1649 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 MIR423-201ENST00000362201 94 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 RNU1-14P-201ENST00000362759 152 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 RNU6-984P-201ENST00000363236 109 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 RPL6P29-201ENST00000414863 865 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AL592293.2-201ENST00000422292 996 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 OR6K4P-201ENST00000423179 955 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 ACTR3P2-201ENST00000439585 1257 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AC114878.1-201ENST00000441166 358 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 MTND2P3-201ENST00000452458 470 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 RN7SL481P-201ENST00000477764 299 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AC106872.2-201ENST00000494303 480 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AC108145.1-201ENST00000503770 153 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 PCNAP1-201ENST00000505363 709 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 KCTD9P2-201ENST00000512203 1013 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 RNA5SP143-201ENST00000516936 115 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AC067904.2-201ENST00000517322 1283 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 RAB9BP1-201ENST00000519581 626 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AC092851.1-201ENST00000535964 478 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AL354984.3-201ENST00000604803 325 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AL356274.1-201ENST00000617064 410 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AL121890.3-201ENST00000618494 516 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 MTND4P10-201ENST00000446199 1363 ntBASIC3.84□□□□□ -1.79
TRAPPC4Q9Y296 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRAPPC4Q9Y296 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRAPPC4Q9Y296 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
TRAPPC4Q9Y296 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 RNU4-7P-201ENST00000364758 141 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 RNA5SP366-201ENST00000365454 123 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 MIR1179-201ENST00000408703 91 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 RN7SKP235-201ENST00000410662 305 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 RHEBP3-201ENST00000411920 351 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 FAR2P2-201ENST00000413041 594 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 MTCYBP7-201ENST00000419540 1134 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 CYP4F29P-201ENST00000420685 446 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 FAR2P4-202ENST00000425399 584 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 RPL18P10-201ENST00000425606 538 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AL365396.1-201ENST00000430854 671 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 CLIC4P1-201ENST00000453177 535 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 RN7SL691P-201ENST00000494487 301 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC018797.3-201ENST00000513388 1241 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 RNA5SP49-201ENST00000516450 115 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 VTA1P2-201ENST00000520205 911 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 C1GALT1P3-201ENST00000522049 819 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC090819.1-201ENST00000523800 1111 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 TRAV8-5-201ENST00000537369 341 ntBASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAPPC4Q9Y296 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms