Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.15□□□□□ -1.74
RNF6Q9Y252 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 RNU1-15P-201ENST00000353977 144 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 RNA5SP509-201ENST00000364577 119 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF6Q9Y252 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AL078604.1-201ENST00000404609 466 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 FCF1P5-201ENST00000406490 482 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 MTND4P11-201ENST00000417020 1058 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 RPS12P5-201ENST00000423449 371 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 SEC63P1-201ENST00000425785 1258 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 NUTF2P7-201ENST00000453086 375 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 ISCUP1-201ENST00000454451 448 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 MTND2P6-201ENST00000455337 1030 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC079804.1-201ENST00000461922 436 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC010618.1-201ENST00000469924 477 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 MTND4LP2-201ENST00000502312 285 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 RN7SKP21-201ENST00000516503 220 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC138701.1-201ENST00000524329 714 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC093014.1-201ENST00000548926 724 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC105129.1-201ENST00000560250 297 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AL109741.3-201ENST00000561748 592 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 ADAD1P2-201ENST00000588476 646 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC020634.1-201ENST00000608701 549 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AL031666.3-201ENST00000609320 1006 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 MIR6716-201ENST00000613413 80 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AL133243.1-201ENST00000614487 366 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AL121890.3-201ENST00000618494 516 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AP005019.3-201ENST00000620418 560 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC068724.3-201ENST00000625906 87 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 U3.53-201ENST00000628922 216 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC090971.4-201ENST00000560291 1800 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF6Q9Y252 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 ASNSP1-201ENST00000518311 1939 ntBASIC4.15□□□□□ -1.75
RNF6Q9Y252 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.15□□□□□ -1.75
RNF6Q9Y252 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF6Q9Y252 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF6Q9Y252 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RNF6Q9Y252 MTND4P21-201ENST00000453886 1357 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC108467.2-201ENST00000617640 1597 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 NXPH1-205ENST00000602349 1953 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RNF6Q9Y252 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF6Q9Y252 AL451142.2-201ENST00000429076 2090 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RNF6Q9Y252 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF6Q9Y252 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF6Q9Y252 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 TAF9BP2-201ENST00000400856 499 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 UBE2V1P15-201ENST00000407776 448 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 MIR1193-201ENST00000408109 78 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 RNA5SP39-201ENST00000411245 120 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 EIF4A1P3-201ENST00000411521 244 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 AL035458.1-201ENST00000433096 585 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF6Q9Y252 CBX1P1-201ENST00000440184 427 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 AL500527.1-201ENST00000448532 255 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 AL451050.1-201ENST00000450126 415 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RNF6Q9Y252 AC104763.1-201ENST00000475274 360 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 RPL36AP41-201ENST00000493820 306 ntBASIC4.14□□□□□ -1.75
RNF6Q9Y252 RPS6P4-201ENST00000494693 758 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms