Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC068769.1-201ENST00000474767 2426 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 RNU5F-6P-201ENST00000362979 116 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 RNA5SP346-201ENST00000363541 121 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 RNU6-308P-201ENST00000390957 107 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 MTND4LP17-201ENST00000414607 293 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC019050.1-201ENST00000418508 492 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 HIGD1AP16-201ENST00000450986 258 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 HIGD1AP8-201ENST00000453927 274 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 RN7SL714P-201ENST00000487050 298 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 NPM1P21-201ENST00000513394 762 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC112206.3-201ENST00000514578 389 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 Y_RNA.691-201ENST00000516611 103 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 OR5D2P-201ENST00000524390 911 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC018558.5-201ENST00000565840 952 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 H3F3BP2-201ENST00000583907 357 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC005332.4-201ENST00000592752 579 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 RNU6-88P-201ENST00000606801 100 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC022467.1-201ENST00000614738 749 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC078938.1-201ENST00000620993 318 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 AC005225.5-201ENST00000623547 2225 ntBASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.92□□□□□ -1.14
PDZRN3Q9UPQ7 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 SNORA21-201ENST00000362423 132 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 Y_RNA.28-201ENST00000362554 111 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 RN7SKP293-201ENST00000411389 296 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC007562.1-201ENST00000421819 517 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC006065.1-201ENST00000422539 802 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC023141.3-201ENST00000436698 278 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 RPL31P20-201ENST00000449593 360 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC002553.3-201ENST00000453002 341 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AL035407.2-201ENST00000454090 378 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC239798.3-201ENST00000454459 408 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AL133351.3-201ENST00000454998 193 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC002075.1-201ENST00000457396 676 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC104564.1-201ENST00000493028 407 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC090958.1-201ENST00000511122 351 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC106800.3-201ENST00000511389 308 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 RPL7L1P4-201ENST00000513004 707 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 RNU6-964P-201ENST00000516524 69 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC022634.1-201ENST00000520765 532 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 MIR3176-201ENST00000582210 90 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms