Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.05□□□□□ -1.6
CTNNA3Q9UI47 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.05□□□□□ -1.6
CTNNA3Q9UI47 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.05□□□□□ -1.6
CTNNA3Q9UI47 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTNNA3Q9UI47 MIR4727-201ENST00000622232 55 ntBASIC5.05□□□□□ -1.6
CTNNA3Q9UI47 MIR3653-201ENST00000625572 110 ntBASIC5.05□□□□□ -1.6
CTNNA3Q9UI47 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CTNNA3Q9UI47 AL049555.1-201ENST00000562834 1933 ntBASIC5.05□□□□□ -1.6
CTNNA3Q9UI47 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.05□□□□□ -1.6
CTNNA3Q9UI47 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTNNA3Q9UI47 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 RNU6-304P-201ENST00000364855 107 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 AL607077.1-201ENST00000401718 499 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 RPL23AP26-201ENST00000412728 464 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 HLA-N-201ENST00000437516 135 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 AC041039.1-201ENST00000485656 536 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 AC139783.2-201ENST00000504847 1145 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 NDUFB4P12-201ENST00000513465 390 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 AC108471.1-201ENST00000513977 287 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 HNRNPKP5-201ENST00000515300 253 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 AC027176.2-201ENST00000559166 746 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 CYP4A43P-201ENST00000568156 121 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 RMST_5.1-201ENST00000618704 126 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 MIR7702-201ENST00000621931 59 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 AC138907.10-201ENST00000623708 983 ntBASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTNNA3Q9UI47 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 RNA5SP502-201ENST00000362694 119 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AL359837.1-201ENST00000381357 287 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 RPL23AP46-201ENST00000438548 490 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 RPL23AP89-201ENST00000439324 255 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 UQCRHP4-201ENST00000471686 272 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 MTND6P6-201ENST00000478031 263 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AC006499.6-201ENST00000511169 607 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AC099522.1-202ENST00000514718 367 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 SMARCE1P4-201ENST00000523647 241 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 HNRNPCP4-201ENST00000571636 900 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 PSMA6P4-201ENST00000603247 718 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AL161729.3-201ENST00000603533 673 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 MIR432-201ENST00000606207 94 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AP006248.2-201ENST00000623309 592 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AL356121.2-201ENST00000624715 780 ntBASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTNNA3Q9UI47 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 RNU6-984P-201ENST00000363236 109 ntBASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 MIR708-201ENST00000390708 88 ntBASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 ST13P16-201ENST00000401760 781 ntBASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 RN7SKP182-201ENST00000410772 298 ntBASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 AC073464.3-201ENST00000422564 712 ntBASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 OR6C71P-201ENST00000432580 913 ntBASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 Z95327.1-201ENST00000446082 482 ntBASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 AC022034.3-201ENST00000471393 478 ntBASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 RNU6-347P-201ENST00000516658 105 ntBASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 AC063950.1-201ENST00000552036 308 ntBASIC5.02□□□□□ -1.61
CTNNA3Q9UI47 ARF4P1-201ENST00000605447 541 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms