Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SCN1A-220ENST00000641603 12506 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 RNU6-249P-201ENST00000363016 102 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 MIR513A2-201ENST00000385249 127 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 RNA5SP306-201ENST00000411087 107 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 RN7SKP247-201ENST00000411094 308 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 AL691447.1-201ENST00000419456 387 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 HIGD1AP4-201ENST00000430194 280 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 TPTE2P1-204ENST00000435256 593 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 RPS17P13-201ENST00000448974 407 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 AC110792.1-201ENST00000491826 472 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 CCNHP1-201ENST00000513311 678 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 NPM1P52-201ENST00000518264 846 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 AC053481.4-201ENST00000583164 216 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 AL592436.1-201ENST00000605135 558 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 AL158196.1-201ENST00000616786 434 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 MTND4P26-201ENST00000415971 1359 ntBASIC5.37□□□□□ -1.55
NPC1L1Q9UHC9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 MIR208A-201ENST00000362287 71 ntBASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 U1.1-201ENST00000384101 164 ntBASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 MIR137-201ENST00000385223 102 ntBASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 SNORA79B-201ENST00000410557 148 ntBASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AC098592.2-201ENST00000413158 265 ntBASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 BX119904.1-201ENST00000432026 348 ntBASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 RNA5SP179-201ENST00000517284 121 ntBASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AC091167.4-201ENST00000605079 184 ntBASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 MIR6075-201ENST00000620782 95 ntBASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AC074140.1-201ENST00000621617 208 ntBASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.36□□□□□ -1.55
NPC1L1Q9UHC9 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 ARL4AP4-201ENST00000434170 518 ntBASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AL353748.1-201ENST00000440753 474 ntBASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AL589765.3-201ENST00000446084 462 ntBASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AC091959.2-201ENST00000477363 321 ntBASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 GNRHR2P1-201ENST00000555315 631 ntBASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AC090312.1-201ENST00000580637 348 ntBASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AC024220.1-201ENST00000603675 484 ntBASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AL008729.2-201ENST00000606393 473 ntBASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 MIR6875-201ENST00000617506 72 ntBASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 AC073530.2-201ENST00000623987 261 ntBASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPC1L1Q9UHC9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 UBE3AP2-201ENST00000429033 2259 ntBASIC5.34□□□□□ -1.55
NPC1L1Q9UHC9 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms