Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 SNORD66.1-201ENST00000391230 76 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 AL034403.1-201ENST00000399414 885 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 RN7SKP182-201ENST00000410772 298 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 PRELID3BP10-201ENST00000431957 584 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 RPL12P46-201ENST00000436610 195 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 AL121877.1-201ENST00000453704 622 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 RPS6P4-201ENST00000494693 758 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 RPS27AP13-201ENST00000498403 237 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 AC124068.1-201ENST00000563131 678 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 AC006116.5-201ENST00000591936 559 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 AC022387.2-201ENST00000604050 448 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 AC007390.2-201ENST00000606229 3803 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 MIR6715B-201ENST00000637172 77 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 AC008013.2-202ENST00000637965 364 ntBASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLIP2Q9UDT6 Z73965.1-201ENST00000623412 2297 ntBASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 RNU1-13P-201ENST00000384499 162 ntBASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 MIR7-1-201ENST00000384871 110 ntBASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 VWA8P1-201ENST00000510889 176 ntBASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AC099522.1-202ENST00000514718 367 ntBASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AC006064.5-201ENST00000541782 248 ntBASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AC087888.1-201ENST00000550884 1254 ntBASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AC084824.1-201ENST00000550917 1005 ntBASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLIP2Q9UDT6 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 RPL23AP48-201ENST00000406913 488 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 RN7SKP263-201ENST00000411194 309 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 RPS23P10-201ENST00000416185 486 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 CALM1P2-201ENST00000452941 448 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 EIF2S2P4-201ENST00000461070 984 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 MIR2116-201ENST00000517221 80 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AC104997.1-201ENST00000519761 717 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AC034236.3-201ENST00000605999 461 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AL356121.2-201ENST00000624715 780 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AC009313.2-201ENST00000417893 1941 ntBASIC4.97□□□□□ -1.61
CLIP2Q9UDT6 AC009229.4-201ENST00000623854 1947 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms