Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 MFSD8-216ENST00000641147 4009 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 RNU6-386P-201ENST00000362650 107 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 RNA5SP322-201ENST00000363617 119 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 SNORD35B-201ENST00000363660 87 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 RNU1-132P-201ENST00000364300 164 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 RNA5SP505-201ENST00000364748 108 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 RNU6-532P-201ENST00000384318 107 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 RPS16P5-201ENST00000406501 404 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 RN7SKP182-201ENST00000410772 298 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 RPA2P2-201ENST00000419698 796 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 CHIAP3-201ENST00000423668 1133 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC234779.1-201ENST00000425910 285 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 USP12PY-201ENST00000427677 1064 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC073069.1-201ENST00000428657 441 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AL392003.1-201ENST00000434394 243 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 RPL21P71-201ENST00000465598 459 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC011037.1-201ENST00000483964 558 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 RN7SL205P-201ENST00000490174 284 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC092045.1-201ENST00000495716 1231 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 NPM1P47-201ENST00000560843 856 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AL451044.1-201ENST00000604867 238 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC138473.1-201ENST00000605717 526 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC009318.3-201ENST00000616916 503 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 uc_338.9-201ENST00000617424 182 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AP001784.1-201ENST00000624107 428 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 AC022893.2-201ENST00000564832 3296 ntBASIC3.84□□□□□ -1.79
VAPAQ9P0L0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VAPAQ9P0L0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VAPAQ9P0L0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.84□□□□□ -1.8
VAPAQ9P0L0 AC007529.1-201ENST00000418574 2178 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 RNU1-89P-201ENST00000384592 164 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 MIR320B1-201ENST00000390209 79 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AC093698.1-201ENST00000423843 571 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 ATP5HP2-201ENST00000433885 485 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AC096638.2-201ENST00000434965 711 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AC006466.1-201ENST00000438721 289 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 HMGB3P21-201ENST00000452483 547 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 FABP3P2-201ENST00000453169 399 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 RPL23AP24-201ENST00000458203 385 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 RPS20P4-201ENST00000461659 355 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 RN7SL481P-201ENST00000477764 299 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 RN7SL271P-201ENST00000487601 295 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 RPL29P14-201ENST00000495837 428 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AC020593.1-201ENST00000507399 299 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 MIR4716-201ENST00000579628 84 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 MIR486-1-201ENST00000612171 68 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 MIR7151-201ENST00000617477 60 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VAPAQ9P0L0 AC106871.1-201ENST00000568324 3102 ntBASIC3.83□□□□□ -1.8
VAPAQ9P0L0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 IPO8P1-201ENST00000455509 3109 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 Z82217.1-201ENST00000625157 8149 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC087565.3-202ENST00000642085 1603 ntBASIC3.82□□□□□ -1.8
VAPAQ9P0L0 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VAPAQ9P0L0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms