Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC005261.4-201ENST00000600047 1385 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 FAM3C2-201ENST00000312214 681 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 OR11H4-201ENST00000315409 1082 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 HMGB3P19-201ENST00000403971 560 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 RNA5SP239-201ENST00000410218 129 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC016397.1-201ENST00000412463 242 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 HSPE1P12-201ENST00000412576 301 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 RPA2P2-201ENST00000419698 796 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 UBE2V2P1-201ENST00000434717 398 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AL356276.2-201ENST00000435919 558 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 FCF1P7-201ENST00000451185 558 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 FABP3P2-201ENST00000453169 399 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC092691.2-201ENST00000461787 803 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC105918.1-201ENST00000474399 838 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AP000926.3-201ENST00000497201 299 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 IGBP1P5-201ENST00000507524 1000 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC090281.1-201ENST00000523019 276 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 MIR4284-201ENST00000578924 81 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AL592494.3-201ENST00000609485 464 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AP000255.1-201ENST00000610276 676 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC078899.5-201ENST00000612475 178 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 AC004825.2-201ENST00000616634 455 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 MIR4727-201ENST00000622232 55 ntBASIC4.04□□□□□ -1.76
TREX1Q9NSU2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC126755.2-208ENST00000327792 462 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC138969.1-213ENST00000331436 462 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 SNORA56-201ENST00000383966 129 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 ST13P16-201ENST00000401760 781 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 OR8G2P-201ENST00000412796 908 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 BTG3P1-201ENST00000435859 716 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 VN1R25P-201ENST00000443385 738 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AL451050.1-201ENST00000450126 415 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 HMGB3P21-201ENST00000452483 547 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 VN1R40P-201ENST00000455196 941 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 HPRT1P2-201ENST00000505250 544 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 CCNHP1-201ENST00000513311 678 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 MIR4700-201ENST00000578311 74 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 AC019131.2-201ENST00000609071 870 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 Z82217.1-201ENST00000625157 8149 ntBASIC4.03□□□□□ -1.76
TREX1Q9NSU2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TREX1Q9NSU2 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.77
TREX1Q9NSU2 AC007342.7-201ENST00000624610 2337 ntBASIC4.03□□□□□ -1.77
TREX1Q9NSU2 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TREX1Q9NSU2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 427.8 ms