Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CISHQ9NSE2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CISHQ9NSE2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CISHQ9NSE2 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 U1.1-201ENST00000384101 164 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 MIR1193-201ENST00000408109 78 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 RNA5SP39-201ENST00000411245 120 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 NPM1P34-201ENST00000428821 893 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 ATP5HP2-201ENST00000433885 485 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 MORF4L1P4-201ENST00000450245 976 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CISHQ9NSE2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 AC069499.1-201ENST00000489433 509 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 PPM1AP1-201ENST00000502740 1135 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 AC084824.1-201ENST00000550917 1005 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 AC090312.1-201ENST00000580637 348 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 AC022916.3-201ENST00000592961 742 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 AC024941.1-201ENST00000612250 334 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 ATE1-AS1-202ENST00000636460 506 ntBASIC4.11□□□□□ -1.75
CISHQ9NSE2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CISHQ9NSE2 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CISHQ9NSE2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CISHQ9NSE2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CISHQ9NSE2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CISHQ9NSE2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CISHQ9NSE2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CISHQ9NSE2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CISHQ9NSE2 AL672167.2-201ENST00000377164 879 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 ELOCP3-201ENST00000439303 348 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 MTND6P18-201ENST00000439477 513 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 RPS29P7-201ENST00000439662 171 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 AC107015.1-201ENST00000466902 747 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 AGGF1P3-201ENST00000493675 1213 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 AC109458.1-201ENST00000508858 316 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 KCTD9P6-201ENST00000522306 950 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 SS18L2P2-201ENST00000583960 235 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 AC099676.1-201ENST00000608886 657 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 AC026368.1-201ENST00000614934 690 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CISHQ9NSE2 AL354798.1-201ENST00000622505 329 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 AP003499.2-201ENST00000624100 483 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 CDRT1-208ENST00000630868 794 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 CR382285.2-201ENST00000624662 1495 ntBASIC4.1□□□□□ -1.75
CISHQ9NSE2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CISHQ9NSE2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CISHQ9NSE2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CISHQ9NSE2 AC026951.1-201ENST00000559530 2459 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 RN7SKP280-201ENST00000364196 304 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 SNORA57.1-201ENST00000391227 145 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 LAP3P1-201ENST00000403648 294 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 AL121834.1-202ENST00000404494 277 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 ZNF602P-201ENST00000405929 924 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 SNORA3.3-201ENST00000408712 125 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 CASKP1-201ENST00000412870 582 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CISHQ9NSE2 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 AC013268.2-201ENST00000420753 337 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 AL391219.1-201ENST00000422570 483 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 AL500522.2-201ENST00000448562 343 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 AC084198.1-201ENST00000477747 402 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 RAC1P2-201ENST00000511164 579 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
CISHQ9NSE2 SCARNA14-201ENST00000516903 136 ntBASIC4.09□□□□□ -1.75
CISHQ9NSE2 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms