Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 AC011266.1-201ENST00000624119 3569 ntBASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.54□□□□□ -1.84
KIAA1549Q9HCM3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 SNORD35B-201ENST00000363660 87 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 RNA5SP513-201ENST00000364648 118 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 RNA5SP44-201ENST00000410446 133 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 SNORA79B-201ENST00000410557 148 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 MTCO1P54-201ENST00000430139 712 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 AC010460.1-201ENST00000507087 466 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 MTND1P6-201ENST00000523621 946 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 MIR5685-201ENST00000579080 79 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 SNX6P1-201ENST00000601728 1224 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 AL357559.1-201ENST00000622228 274 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 AC073530.2-201ENST00000623987 261 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 AC097504.1-201ENST00000515103 2415 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 AC093909.5-201ENST00000621839 1799 ntBASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.53□□□□□ -1.84
KIAA1549Q9HCM3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 SNORA71.3-201ENST00000362582 128 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 SNORA5A-201ENST00000384111 134 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 MIR30B-201ENST00000384850 88 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 SNORA3C-201ENST00000408792 125 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AC244505.7-201ENST00000599675 272 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AL049634.3-201ENST00000604968 457 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AF001550.2-201ENST00000636643 217 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 RNA5SP119-201ENST00000362715 117 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 SNORA73.2-201ENST00000364946 201 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 CBX1P3-201ENST00000413296 527 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 RPS6P4-201ENST00000494693 758 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 SNORA67.7-201ENST00000516664 135 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 NDUFA5P2-201ENST00000519723 344 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 TRAV15-201ENST00000556680 249 ntBASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.52□□□□□ -1.85
KIAA1549Q9HCM3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 SNORD74.4-201ENST00000364129 80 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 SNORD46.1-201ENST00000364139 104 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 HIGD1AP4-201ENST00000430194 280 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AC007389.2-201ENST00000434630 306 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 SEPT14P1-201ENST00000458703 648 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms