Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC091959.2-201ENST00000477363 321 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 RN7SL132P-201ENST00000478131 296 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 SAP18P1-201ENST00000512058 390 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 MTND1P6-201ENST00000523621 946 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AL592436.1-201ENST00000605135 558 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AC017104.4-201ENST00000636283 1592 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AL122126.1-201ENST00000546905 1318 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC240504.1-201ENST00000395709 845 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 RFESDP1-201ENST00000422350 461 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC243772.1-201ENST00000451620 410 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 SNORA84-201ENST00000459229 133 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC092691.2-201ENST00000461787 803 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 RNU1-45P-201ENST00000517191 141 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC023632.4-201ENST00000517783 191 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC090312.1-201ENST00000580637 348 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC012417.1-201ENST00000582307 1039 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC099669.2-201ENST00000616549 437 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AL356863.1-201ENST00000623378 1080 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 AP005264.7-201ENST00000625003 745 ntBASIC4.37□□□□□ -1.71
NXF3Q9H4D5 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NXF3Q9H4D5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 RN7SKP202-201ENST00000410439 330 ntBASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 MAPRE1P3-201ENST00000435438 796 ntBASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AL357520.1-201ENST00000441557 453 ntBASIC4.36□□□□□ -1.71
NXF3Q9H4D5 GEMIN8P3-201ENST00000445417 720 ntBASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AC073587.1-201ENST00000447093 876 ntBASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 HMGB1P23-201ENST00000518743 568 ntBASIC4.36□□□□□ -1.71
NXF3Q9H4D5 MTCO1P49-201ENST00000523429 802 ntBASIC4.36□□□□□ -1.71
NXF3Q9H4D5 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 HSPE1P5-201ENST00000561489 272 ntBASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.36□□□□□ -1.71
NXF3Q9H4D5 BMS1P21-201ENST00000634565 365 ntBASIC4.36□□□□□ -1.71
NXF3Q9H4D5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NXF3Q9H4D5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NXF3Q9H4D5 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms