Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 MAPK10-303ENST00000641324 3959 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCAPERQ9BY12 OR51C1P-202ENST00000641159 1444 ntBASIC5.92□□□□□ -1.46
SCAPERQ9BY12 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 MIR490-201ENST00000384865 128 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 RPL23AP89-201ENST00000439324 255 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 BX510359.1-201ENST00000456973 237 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 SETP6-201ENST00000479329 568 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 OR5B10P-201ENST00000532869 642 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 AC007458.1-201ENST00000542812 373 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 RNU1-30P-201ENST00000606575 163 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 AC027290.2-201ENST00000623210 18662 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 AC083899.2-201ENST00000423285 1376 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 ATP5A1P2-201ENST00000412323 255 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 SEPT7P8-201ENST00000413308 775 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 RPS7P15-201ENST00000415804 584 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 AC008155.2-201ENST00000464337 397 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 RPS4XP10-201ENST00000465034 731 ntBASIC5.91□□□□□ -1.46
SCAPERQ9BY12 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.91□□□□□ -1.46
SCAPERQ9BY12 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.9□□□□□ -1.46
SCAPERQ9BY12 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SCAPERQ9BY12 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SCAPERQ9BY12 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.9□□□□□ -1.46
SCAPERQ9BY12 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SCAPERQ9BY12 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SCAPERQ9BY12 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SCAPERQ9BY12 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.9□□□□□ -1.46
SCAPERQ9BY12 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 AL158156.1-201ENST00000422509 473 ntBASIC5.9□□□□□ -1.47
SCAPERQ9BY12 HIGD1AP4-201ENST00000430194 280 ntBASIC5.9□□□□□ -1.47
SCAPERQ9BY12 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 AC012158.1-204ENST00000483430 465 ntBASIC5.9□□□□□ -1.47
SCAPERQ9BY12 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 TCP11X3P-202ENST00000514289 1254 ntBASIC5.9□□□□□ -1.47
SCAPERQ9BY12 AC100770.1-201ENST00000532310 322 ntBASIC5.9□□□□□ -1.47
SCAPERQ9BY12 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 AC022968.1-201ENST00000567372 442 ntBASIC5.9□□□□□ -1.47
SCAPERQ9BY12 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
SCAPERQ9BY12 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 ZNF962P-201ENST00000443465 3140 ntBASIC5.89□□□□□ -1.47
SCAPERQ9BY12 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 RPL21P23-201ENST00000446654 460 ntBASIC5.89□□□□□ -1.47
SCAPERQ9BY12 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 HMGB1P19-201ENST00000517578 577 ntBASIC5.89□□□□□ -1.47
SCAPERQ9BY12 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 AL392088.2-201ENST00000637607 285 ntBASIC5.89□□□□□ -1.47
SCAPERQ9BY12 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCAPERQ9BY12 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCAPERQ9BY12 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCAPERQ9BY12 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.88□□□□□ -1.47
SCAPERQ9BY12 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCAPERQ9BY12 PRELID3BP10-201ENST00000431957 584 ntBASIC5.88□□□□□ -1.47
SCAPERQ9BY12 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.88□□□□□ -1.47
SCAPERQ9BY12 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCAPERQ9BY12 AC005008.1-201ENST00000456151 612 ntBASIC5.88□□□□□ -1.47
SCAPERQ9BY12 UBDP1-202ENST00000457888 382 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms