Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 TRIM60P17-201ENST00000415181 719 ntBASIC5.44□□□□□ -1.54
USP47Q96K76 AC093578.1-201ENST00000415219 368 ntBASIC5.44□□□□□ -1.54
USP47Q96K76 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.44□□□□□ -1.54
USP47Q96K76 KCTD9P3-201ENST00000434597 1169 ntBASIC5.44□□□□□ -1.54
USP47Q96K76 RPL7P15-201ENST00000461190 712 ntBASIC5.44□□□□□ -1.54
USP47Q96K76 RPL5P30-201ENST00000465511 891 ntBASIC5.44□□□□□ -1.54
USP47Q96K76 AC012123.2-201ENST00000485809 248 ntBASIC5.44□□□□□ -1.54
USP47Q96K76 RN7SL323P-201ENST00000494712 295 ntBASIC5.44□□□□□ -1.54
USP47Q96K76 RNA5SP208-201ENST00000516156 78 ntBASIC5.44□□□□□ -1.54
USP47Q96K76 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.44□□□□□ -1.54
USP47Q96K76 AC016839.1-201ENST00000578162 867 ntBASIC5.44□□□□□ -1.54
USP47Q96K76 AL121772.2-201ENST00000614331 297 ntBASIC5.44□□□□□ -1.54
USP47Q96K76 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.44□□□□□ -1.54
USP47Q96K76 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.44□□□□□ -1.54
USP47Q96K76 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.44□□□□□ -1.54
USP47Q96K76 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP47Q96K76 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP47Q96K76 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
USP47Q96K76 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
USP47Q96K76 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
USP47Q96K76 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP47Q96K76 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP47Q96K76 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
USP47Q96K76 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.43□□□□□ -1.54
USP47Q96K76 SETP15-201ENST00000412724 337 ntBASIC5.43□□□□□ -1.54
USP47Q96K76 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.43□□□□□ -1.54
USP47Q96K76 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.43□□□□□ -1.54
USP47Q96K76 AC135999.1-201ENST00000478962 479 ntBASIC5.43□□□□□ -1.54
USP47Q96K76 RPS26P24-201ENST00000497656 331 ntBASIC5.43□□□□□ -1.54
USP47Q96K76 AC025445.1-201ENST00000502728 300 ntBASIC5.43□□□□□ -1.54
USP47Q96K76 AC139783.2-201ENST00000504847 1145 ntBASIC5.43□□□□□ -1.54
USP47Q96K76 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.43□□□□□ -1.54
USP47Q96K76 RAC1P2-201ENST00000511164 579 ntBASIC5.43□□□□□ -1.54
USP47Q96K76 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.43□□□□□ -1.54
USP47Q96K76 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.43□□□□□ -1.54
USP47Q96K76 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.43□□□□□ -1.54
USP47Q96K76 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.43□□□□□ -1.54
USP47Q96K76 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.43□□□□□ -1.54
USP47Q96K76 MIR4433B-201ENST00000581329 102 ntBASIC5.43□□□□□ -1.54
USP47Q96K76 AC005255.1-201ENST00000593748 216 ntBASIC5.43□□□□□ -1.54
USP47Q96K76 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP47Q96K76 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
USP47Q96K76 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP47Q96K76 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP47Q96K76 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP47Q96K76 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP47Q96K76 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.43□□□□□ -1.54
USP47Q96K76 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.43□□□□□ -1.54
USP47Q96K76 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP47Q96K76 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
USP47Q96K76 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
USP47Q96K76 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP47Q96K76 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.43□□□□□ -1.54
USP47Q96K76 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP47Q96K76 RNA5SP97-201ENST00000365006 84 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 SOD2P1-201ENST00000396543 562 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 SNORA11C-201ENST00000408532 129 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 RANP7-201ENST00000418085 644 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 OR4F13P-201ENST00000428478 931 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 NPM1P34-201ENST00000428821 893 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.42□□□□□ -1.54
USP47Q96K76 AL157884.3-201ENST00000448273 1184 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.42□□□□□ -1.54
USP47Q96K76 AC114982.2-201ENST00000461396 358 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 RPL7P49-201ENST00000471402 708 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AC084198.1-201ENST00000477747 402 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.42□□□□□ -1.54
USP47Q96K76 RNU6-1334P-201ENST00000516032 105 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 PAICSP4-201ENST00000517543 1253 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP47Q96K76 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.42□□□□□ -1.54
USP47Q96K76 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.42□□□□□ -1.54
USP47Q96K76 CCNG2P1-201ENST00000549521 1000 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.42□□□□□ -1.54
USP47Q96K76 AC090877.1-201ENST00000561418 344 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 SULT1C2P2-201ENST00000562517 294 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.42□□□□□ -1.54
USP47Q96K76 AL139395.1-201ENST00000603662 160 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AC096553.1-201ENST00000605169 829 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.42□□□□□ -1.54
USP47Q96K76 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.42□□□□□ -1.54
USP47Q96K76 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
USP47Q96K76 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
USP47Q96K76 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
USP47Q96K76 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP47Q96K76 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.42□□□□□ -1.54
USP47Q96K76 IPO8P1-201ENST00000455509 3109 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP47Q96K76 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.42□□□□□ -1.54
USP47Q96K76 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
USP47Q96K76 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP47Q96K76 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.42□□□□□ -1.54
USP47Q96K76 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP47Q96K76 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
USP47Q96K76 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP47Q96K76 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.42□□□□□ -1.54
USP47Q96K76 RNA5SP119-201ENST00000362715 117 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 NACAP7-201ENST00000407371 609 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.42□□□□□ -1.54
USP47Q96K76 AC008280.1-201ENST00000418851 412 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms