Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC104306.1-201ENST00000449702 371 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 MRPL35P4-201ENST00000453682 566 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC147055.3-201ENST00000510547 851 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 RNA5SP92-201ENST00000516437 110 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 RN7SKP66-201ENST00000516681 231 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC008694.2-201ENST00000517591 306 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC069240.1-201ENST00000548774 375 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 MIR4789-201ENST00000577469 82 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 VN1R88P-201ENST00000596787 292 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC008536.1-201ENST00000602872 669 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC010872.1-201ENST00000624225 675 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC073055.1-201ENST00000456901 1621 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC099654.2-201ENST00000433031 1980 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFT1Q96AA3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 SAGE2P-201ENST00000420011 2126 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFT1Q96AA3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFT1Q96AA3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 SNORA51.12-201ENST00000384448 134 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AL645733.1-201ENST00000402250 217 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 ARL4AP5-201ENST00000404372 599 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 GTF2IP5-201ENST00000414608 731 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC114814.2-201ENST00000419195 485 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 RPL30P3-201ENST00000424262 333 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC013262.1-201ENST00000426710 252 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC023347.2-201ENST00000433994 462 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC000041.1-201ENST00000439655 175 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 RPS26P30-201ENST00000443431 335 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 AL050341.1-201ENST00000447743 313 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 OR51B8P-201ENST00000449892 769 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 RPL23AP56-201ENST00000460778 453 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC025445.1-201ENST00000502728 300 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 IGBP1P5-201ENST00000507524 1000 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 RNU2-30P-201ENST00000516209 141 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 RN7SKP147-201ENST00000517154 244 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 IGLV3-26-201ENST00000520756 302 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC090151.1-201ENST00000520784 730 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 AP003066.2-201ENST00000529375 555 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC007225.2-201ENST00000562529 256 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC126365.2-201ENST00000580630 379 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC008638.3-201ENST00000603341 463 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 BNIP3P31-201ENST00000604515 566 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 BNIP3P4-201ENST00000604946 565 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC010424.2-201ENST00000607594 443 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AC005156.1-201ENST00000613371 573 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 AL353726.1-201ENST00000614041 1000 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 AL353662.3-201ENST00000625131 237 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 MIR4302-201ENST00000638058 60 ntBASIC4.11□□□□□ -1.75
RFT1Q96AA3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.11□□□□□ -1.75
RFT1Q96AA3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFT1Q96AA3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms