Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC022133.1-201ENST00000490961 571 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AC092045.1-201ENST00000495716 1231 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 RPS24P16-201ENST00000497294 392 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.86□□□□□ -1.47
ERCC4Q92889 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AF213884.2-201ENST00000510417 903 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC4Q92889 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC4Q92889 RNU6-941P-201ENST00000516346 108 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 MTND1P5-201ENST00000517906 940 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.86□□□□□ -1.47
ERCC4Q92889 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC4Q92889 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
ERCC4Q92889 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AC008083.2-201ENST00000546707 476 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AC127381.1-201ENST00000555979 939 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AGGF1P4-201ENST00000568249 801 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC4Q92889 VN1R88P-201ENST00000596787 292 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AL592221.1-201ENST00000605266 382 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AC097505.1-201ENST00000610199 565 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.86□□□□□ -1.47
ERCC4Q92889 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC4Q92889 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC4Q92889 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC4Q92889 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC4Q92889 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC4Q92889 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC4Q92889 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ERCC4Q92889 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC4Q92889 AC100871.1-201ENST00000507871 1456 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC073429.2-201ENST00000569694 1444 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC4Q92889 RN7SKP153-201ENST00000365026 316 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.85□□□□□ -1.47
ERCC4Q92889 MIR143-201ENST00000385300 106 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 RN7SKP59-201ENST00000410520 314 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AL390774.1-201ENST00000411924 246 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 NRBF2P2-201ENST00000413087 861 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC4Q92889 TMX2P1-201ENST00000436507 708 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.85□□□□□ -1.47
ERCC4Q92889 AL591503.2-201ENST00000442314 1005 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 MTCO2P25-201ENST00000447065 681 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 HMGB1P16-201ENST00000447155 540 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.85□□□□□ -1.47
ERCC4Q92889 RPL5P24-201ENST00000463742 885 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 RN7SL51P-201ENST00000468230 285 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC021205.1-201ENST00000468797 348 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC073522.1-201ENST00000483312 377 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 RN7SL346P-201ENST00000491561 294 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC010587.2-201ENST00000511727 448 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.85□□□□□ -1.47
ERCC4Q92889 RNU6-416P-201ENST00000516265 103 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.85□□□□□ -1.47
ERCC4Q92889 NDUFA5P2-201ENST00000519723 344 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.85□□□□□ -1.47
ERCC4Q92889 AC022360.1-201ENST00000521058 340 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC4Q92889 OR4C2P-201ENST00000530855 1064 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC092851.1-201ENST00000535964 478 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.85□□□□□ -1.47
ERCC4Q92889 NIFKP8-201ENST00000560500 874 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.85□□□□□ -1.47
ERCC4Q92889 RSL24D1P11-201ENST00000591045 491 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.85□□□□□ -1.47
ERCC4Q92889 FO393422.1-201ENST00000603908 708 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC009597.2-201ENST00000604659 592 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 MIR6768-201ENST00000610734 72 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC007204.2-201ENST00000615022 616 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AL359715.5-201ENST00000623431 443 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC092656.1-203ENST00000624134 423 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC073869.10-201ENST00000642016 354 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.85□□□□□ -1.47
ERCC4Q92889 AL355852.1-201ENST00000454081 1771 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC4Q92889 AC087359.1-201ENST00000508335 1740 ntBASIC5.85□□□□□ -1.47
ERCC4Q92889 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.84□□□□□ -1.47
ERCC4Q92889 AC006210.2-201ENST00000367074 1545 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
ERCC4Q92889 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC4Q92889 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
ERCC4Q92889 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC4Q92889 AC007996.1-201ENST00000620414 2821 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.84□□□□□ -1.47
ERCC4Q92889 AC005294.1-201ENST00000355509 281 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 RNA5SP319-201ENST00000362768 119 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 Y_RNA.559-201ENST00000384686 107 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 MIR525-201ENST00000384978 85 ntBASIC5.84□□□□□ -1.47
ERCC4Q92889 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms