Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
ZNF439Q8NDP4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ZNF439Q8NDP4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF439Q8NDP4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF439Q8NDP4 AC027287.1-201ENST00000553115 1453 ntBASIC3.41□□□□□ -1.86
ZNF439Q8NDP4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ZNF439Q8NDP4 AC110792.3-201ENST00000595906 1614 ntBASIC3.41□□□□□ -1.86
ZNF439Q8NDP4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
ZNF439Q8NDP4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ZNF439Q8NDP4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ZNF439Q8NDP4 AC083899.2-201ENST00000423285 1376 ntBASIC3.4□□□□□ -1.86
ZNF439Q8NDP4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
ZNF439Q8NDP4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ZNF439Q8NDP4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.4□□□□□ -1.86
ZNF439Q8NDP4 AL139811.1-201ENST00000424779 2299 ntBASIC3.4□□□□□ -1.86
ZNF439Q8NDP4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AL161909.1-201ENST00000397390 712 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 RNA5SP306-201ENST00000411087 107 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 RPL37P18-201ENST00000411602 243 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 RPL23AP26-201ENST00000412728 464 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 RPS12P23-201ENST00000419579 400 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 BTF3P10-201ENST00000433415 495 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AL353093.1-201ENST00000441292 436 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 ANP32BP2-201ENST00000454525 545 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 RPL36AP13-201ENST00000457490 317 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AC099522.1-202ENST00000514718 367 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AL360157.1-201ENST00000565962 87 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AC022655.2-201ENST00000577280 318 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AC104785.1-201ENST00000603220 588 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 HMGB1P50-201ENST00000605814 607 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 CASC19-284ENST00000642142 1868 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 ERCC6-202ENST00000374127 1782 ntBASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF439Q8NDP4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC106871.1-201ENST00000568324 3102 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 RNU6-225P-201ENST00000384613 103 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC016769.2-201ENST00000414815 475 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC009480.2-201ENST00000422916 432 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC093084.1-201ENST00000424233 687 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 DNAJC19P7-201ENST00000428811 344 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 CEACAMP9-201ENST00000442990 513 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC069277.2-201ENST00000454211 432 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AF213884.1-201ENST00000488102 463 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC091515.1-201ENST00000548110 679 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 TVP23BP1-201ENST00000557500 617 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 MIR4277-201ENST00000578298 84 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 SNX6P1-201ENST00000601728 1224 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AL713998.2-201ENST00000604538 1198 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 BX323046.1-201ENST00000610145 535 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 MIR6820-201ENST00000611508 62 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC023043.4-201ENST00000612081 449 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 MIR7151-201ENST00000617477 60 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 AC011944.2-201ENST00000624440 683 ntBASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.39□□□□□ -1.87
ZNF439Q8NDP4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms