Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC092634.2-201ENST00000428146 1010 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 DNAJA1P5-201ENST00000440278 943 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 RPL7P59-201ENST00000447700 943 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 HMGN1P5-201ENST00000448591 263 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 SCARNA10-201ENST00000459255 330 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC007998.1-201ENST00000474156 672 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 SIAH1P1-201ENST00000479411 923 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC021146.3-201ENST00000511911 260 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC007016.1-201ENST00000512110 244 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 RPL7L1P4-201ENST00000513004 707 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC104417.1-201ENST00000523974 751 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 OR4G1P-201ENST00000588632 938 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 IMMP1LP3-201ENST00000604197 224 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 SUGT1P3-202ENST00000604259 383 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC005377.1-201ENST00000605126 456 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 OR7A19P-201ENST00000608051 733 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC026368.1-201ENST00000614934 690 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 uc_338.18-201ENST00000615451 175 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 SNX18P1Y-201ENST00000616231 511 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AL512506.2-201ENST00000624472 458 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 ZNF734P-201ENST00000419494 1534 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 ECM1P2-201ENST00000503354 1577 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC117529.2-201ENST00000512159 2068 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 RNU6-839P-201ENST00000363347 108 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 RNA5SP167-201ENST00000365461 116 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AL021331.1-201ENST00000402817 582 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 RNA5SP146-201ENST00000410743 123 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 EI24P1-201ENST00000416584 867 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 OFD1P18Y-201ENST00000420889 959 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 CEACAMP9-201ENST00000442990 513 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 OR7E125P-201ENST00000443450 846 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC104651.2-201ENST00000447549 528 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 SNRPGP5-201ENST00000456003 220 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC008837.1-201ENST00000511513 412 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC112206.4-201ENST00000515142 405 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 SNORD46.2-201ENST00000516021 102 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 IGKV2-4-201ENST00000523070 340 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC092470.1-201ENST00000546187 132 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AL352979.3-201ENST00000553515 247 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 NMNAT1P1-201ENST00000554095 876 ntBASIC3.34□□□□□ -1.87
LINC01561Q8N1V8 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms