Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC104662.1-201ENST00000604448 511 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 MIR378J-201ENST00000611988 109 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 MIR7151-201ENST00000617477 60 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 AL158062.1-201ENST00000619632 745 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 AP003497.2-201ENST00000624220 967 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 AL133243.3-201ENST00000617415 3004 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SIX1Q15475 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SIX1Q15475 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.27□□□□□ -1.73
SIX1Q15475 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX1Q15475 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX1Q15475 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX1Q15475 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.26□□□□□ -1.73
SIX1Q15475 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SIX1Q15475 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SIX1Q15475 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SIX1Q15475 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SIX1Q15475 RNU4-44P-201ENST00000363050 141 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 RNU1-132P-201ENST00000364300 164 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX1Q15475 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SIX1Q15475 P2RY10P2-201ENST00000416730 913 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 ARL2BPP3-201ENST00000421226 480 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 AC093084.1-201ENST00000424233 687 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 CNOT7P1-201ENST00000429006 852 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 RPS29P17-201ENST00000430795 166 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 AC006011.1-201ENST00000442758 349 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 AL589765.3-201ENST00000446084 462 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX1Q15475 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX1Q15475 AC002553.2-201ENST00000453217 340 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 RPS6P2-201ENST00000454208 705 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 RPL36AP13-201ENST00000457490 317 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 RNA5SP246-201ENST00000458909 119 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 AF213884.1-201ENST00000488102 463 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX1Q15475 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX1Q15475 AK3P4-201ENST00000504283 583 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 HPRT1P2-201ENST00000505250 544 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX1Q15475 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX1Q15475 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX1Q15475 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX1Q15475 AC105233.3-201ENST00000531125 744 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX1Q15475 RPL23AP87-202ENST00000573039 466 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 MIR4284-201ENST00000578924 81 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.26□□□□□ -1.73
SIX1Q15475 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX1Q15475 AC015911.5-201ENST00000587076 451 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 AC068790.4-201ENST00000602474 263 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX1Q15475 AC093765.1-201ENST00000603758 881 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.26□□□□□ -1.73
SIX1Q15475 AC120053.1-201ENST00000607706 736 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 AL121873.1-201ENST00000616013 524 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 AC245389.2-201ENST00000616023 576 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 AC242843.1-201ENST00000618702 573 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.26□□□□□ -1.73
SIX1Q15475 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX1Q15475 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SIX1Q15475 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SIX1Q15475 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SIX1Q15475 VPS35P1-201ENST00000563400 1518 ntBASIC4.26□□□□□ -1.73
SIX1Q15475 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX1Q15475 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX1Q15475 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX1Q15475 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX1Q15475 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX1Q15475 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 RNU6-650P-201ENST00000365658 111 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX1Q15475 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
SIX1Q15475 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX1Q15475 AL034403.1-201ENST00000399414 885 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 RPL26P37-201ENST00000411983 438 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX1Q15475 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX1Q15475 AC092647.1-201ENST00000420654 287 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 AL391219.1-201ENST00000422570 483 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX1Q15475 AL358472.1-201ENST00000431295 329 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 MTCYBP29-201ENST00000436327 1006 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX1Q15475 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 RPL7P32-201ENST00000457119 744 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SIX1Q15475 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX1Q15475 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 AC113192.3-201ENST00000529152 742 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 AC093014.1-201ENST00000548926 724 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX1Q15475 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.25□□□□□ -1.73
SIX1Q15475 AC022968.1-201ENST00000567372 442 ntBASIC4.25□□□□□ -1.73
SIX1Q15475 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.25□□□□□ -1.73
SIX1Q15475 MIR4715-201ENST00000584117 79 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms