Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH1Q08174 ACTR3P2-201ENST00000439585 1257 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC064862.5-201ENST00000440618 334 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AL031681.1-201ENST00000443304 400 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH1Q08174 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH1Q08174 SBDSP1-204ENST00000453858 737 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDH1Q08174 RPS15AP17-201ENST00000470598 390 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC007537.2-201ENST00000472093 511 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH1Q08174 RN7SL326P-201ENST00000477493 296 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 SNRPCP11-201ENST00000492453 205 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH1Q08174 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH1Q08174 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDH1Q08174 AC108471.1-201ENST00000513977 287 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 RNU6-1045P-201ENST00000516321 107 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH1Q08174 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH1Q08174 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDH1Q08174 AC011611.1-201ENST00000552179 197 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 SULT1C2P1-202ENST00000562418 459 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC055876.1-202ENST00000567053 138 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDH1Q08174 ARGFXP2-201ENST00000579304 949 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH1Q08174 MIR4732-201ENST00000581873 76 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC017100.2-201ENST00000584628 355 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH1Q08174 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDH1Q08174 AL360085.1-201ENST00000604713 532 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AL136097.3-201ENST00000611097 505 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 MIR6885-201ENST00000612241 66 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 MIR7159-201ENST00000620587 66 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC024940.5-201ENST00000622889 474 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC015871.5-202ENST00000623252 701 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AL162377.2-201ENST00000624532 337 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC138649.5-201ENST00000637456 137 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
PCDH1Q08174 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 ERCC6-202ENST00000374127 1782 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
PCDH1Q08174 AOX3P-204ENST00000491025 2107 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC123769.1-201ENST00000530992 3192 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 LINC00622-201ENST00000562811 1570 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH1Q08174 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDH1Q08174 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PCDH1Q08174 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PCDH1Q08174 HDAC1P2-201ENST00000453661 1398 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH1Q08174 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH1Q08174 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
PCDH1Q08174 OR5J1P-201ENST00000313544 939 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDH1Q08174 RPL23AP32-201ENST00000395315 459 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
PCDH1Q08174 MRPL42P2-201ENST00000403169 426 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDH1Q08174 RNU6-373P-201ENST00000411247 98 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDH1Q08174 MRPL50P2-201ENST00000416821 482 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AC007562.1-201ENST00000421819 517 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 RPS26P40-201ENST00000435209 294 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDH1Q08174 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDH1Q08174 AC023274.2-201ENST00000445264 521 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDH1Q08174 RNU6-327P-201ENST00000516270 127 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 RNU6-835P-201ENST00000516974 104 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDH1Q08174 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDH1Q08174 OR5M2P-201ENST00000529003 936 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AC008127.2-201ENST00000549925 1075 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 HSPE1P2-201ENST00000554777 306 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AL109766.1-201ENST00000555080 552 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDH1Q08174 OR4H6P-201ENST00000563771 921 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AC122134.1-201ENST00000565664 1104 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDH1Q08174 AL355375.2-201ENST00000574825 175 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDH1Q08174 NPIPB1P-202ENST00000588786 828 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms