Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC012417.1-201ENST00000582307 1039 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 AC114878.2-201ENST00000604863 1251 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 AC010200.2-201ENST00000605098 235 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 MIR6758-201ENST00000620653 63 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HMGCS1Q01581 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC007342.7-201ENST00000624610 2337 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 FAM3C2-201ENST00000312214 681 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 RNU6-618P-201ENST00000363518 112 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 SNORD35B-201ENST00000363660 87 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 SNORA62-201ENST00000365493 153 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 LAP3P1-201ENST00000403648 294 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 C4BPAP2-201ENST00000428434 478 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 TPTE2P3-201ENST00000441562 1189 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 VN1R25P-201ENST00000443385 738 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 FGF7P3-201ENST00000454645 303 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 VN1R40P-201ENST00000455196 941 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 RNA5SP246-201ENST00000458909 119 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 RPS23P7-201ENST00000466210 444 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC026979.1-201ENST00000492525 396 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 RPL31P61-201ENST00000496160 376 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 PRELID3BP7-201ENST00000503606 469 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC099522.1-202ENST00000514718 367 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 SEC11B-201ENST00000518383 499 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 MTND1P6-201ENST00000523621 946 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC087888.1-201ENST00000550884 1254 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC068714.1-201ENST00000559623 800 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 MIR3138-201ENST00000585238 82 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 OR1AB1P-201ENST00000585564 761 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC090953.1-201ENST00000604305 1092 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC104662.1-201ENST00000604448 511 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 MLECP1-201ENST00000615893 709 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 AC067852.7-201ENST00000623270 535 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 CYP1D1P-201ENST00000416662 1433 ntBASIC3.93□□□□□ -1.78
HMGCS1Q01581 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCS1Q01581 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS1Q01581 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 RPL32P3-201ENST00000359025 275 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS1Q01581 AL034374.1-201ENST00000406329 351 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS1Q01581 RPL23AP26-201ENST00000412728 464 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 MTCYBP7-201ENST00000419540 1134 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 AC092647.1-201ENST00000420654 287 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 OR6K4P-201ENST00000423179 955 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 AL358472.1-201ENST00000431295 329 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 AC093716.1-201ENST00000435923 377 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 GSTA7P-201ENST00000438425 448 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 CACYBPP1-201ENST00000438592 684 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 RPL7AP52-201ENST00000458096 790 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 METTL15P1-201ENST00000481421 1045 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 RPS26P15-201ENST00000488067 348 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 AC091167.1-201ENST00000492017 396 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 RPL29P14-201ENST00000495837 428 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 PPM1AP1-201ENST00000502740 1135 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 AC108475.1-201ENST00000507880 950 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 KPNA2P3-201ENST00000584190 848 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 ELOCP28-201ENST00000590044 317 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS1Q01581 IPO5P1-202ENST00000600039 287 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS1Q01581 AP000255.1-201ENST00000610276 676 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 AC005962.2-201ENST00000611427 652 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 MIR3653-201ENST00000625572 110 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS1Q01581 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS1Q01581 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGCS1Q01581 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGCS1Q01581 AC087565.3-202ENST00000642085 1603 ntBASIC3.92□□□□□ -1.78
HMGCS1Q01581 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms