Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNA1P78396 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNA1P78396 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNA1P78396 AL672167.1-205ENST00000641112 3080 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNA1P78396 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCNA1P78396 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCNA1P78396 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNA1P78396 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNA1P78396 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.8□□□□□ -1.64
CCNA1P78396 HSPD1P16-201ENST00000402302 394 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 MIR1911-201ENST00000410783 80 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.8□□□□□ -1.64
CCNA1P78396 TPT1P2-201ENST00000413105 503 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNA1P78396 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.8□□□□□ -1.64
CCNA1P78396 AC073069.1-201ENST00000428657 441 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNA1P78396 RPEP2-201ENST00000432149 701 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNA1P78396 snoU13.22-201ENST00000459428 104 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 AC112206.1-201ENST00000468416 477 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 SEPT7P6-201ENST00000469999 1143 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.8□□□□□ -1.64
CCNA1P78396 AC010627.1-201ENST00000503819 1294 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 BTG4P1-201ENST00000510421 183 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.8□□□□□ -1.64
CCNA1P78396 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNA1P78396 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.8□□□□□ -1.64
CCNA1P78396 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.8□□□□□ -1.64
CCNA1P78396 VTA1P2-201ENST00000520205 911 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNA1P78396 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.8□□□□□ -1.64
CCNA1P78396 HSPE1P5-201ENST00000561489 272 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.8□□□□□ -1.64
CCNA1P78396 AC027455.1-201ENST00000574104 594 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 AC027281.1-201ENST00000574178 758 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 AC022655.2-201ENST00000577280 318 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 AC005255.1-201ENST00000593748 216 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 BMS1P7-201ENST00000602440 1052 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 MIR6500-201ENST00000622700 86 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 AL118496.1-201ENST00000440201 1812 ntBASIC4.8□□□□□ -1.64
CCNA1P78396 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNA1P78396 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CCNA1P78396 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.8□□□□□ -1.64
CCNA1P78396 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCNA1P78396 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCNA1P78396 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCNA1P78396 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCNA1P78396 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCNA1P78396 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCNA1P78396 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCNA1P78396 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCNA1P78396 RNA5SP44-201ENST00000410446 133 ntBASIC4.79□□□□□ -1.64
CCNA1P78396 VDAC1P9-201ENST00000412766 841 ntBASIC4.79□□□□□ -1.64
CCNA1P78396 AC048351.1-201ENST00000420064 602 ntBASIC4.79□□□□□ -1.64
CCNA1P78396 AC018644.1-201ENST00000429934 551 ntBASIC4.79□□□□□ -1.64
CCNA1P78396 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.79□□□□□ -1.64
CCNA1P78396 AL591473.1-201ENST00000464297 313 ntBASIC4.79□□□□□ -1.64
CCNA1P78396 AC108751.2-201ENST00000469993 231 ntBASIC4.79□□□□□ -1.64
CCNA1P78396 AC138938.1-201ENST00000515431 782 ntBASIC4.79□□□□□ -1.64
CCNA1P78396 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.79□□□□□ -1.64
CCNA1P78396 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.79□□□□□ -1.64
CCNA1P78396 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.79□□□□□ -1.64
CCNA1P78396 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.79□□□□□ -1.64
CCNA1P78396 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.79□□□□□ -1.64
CCNA1P78396 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.79□□□□□ -1.64
CCNA1P78396 AC097505.1-201ENST00000610199 565 ntBASIC4.79□□□□□ -1.64
CCNA1P78396 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.79□□□□□ -1.64
CCNA1P78396 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CCNA1P78396 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.79□□□□□ -1.64
CCNA1P78396 AL133268.1-201ENST00000405676 1401 ntBASIC4.79□□□□□ -1.64
CCNA1P78396 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCNA1P78396 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CCNA1P78396 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.78□□□□□ -1.64
CCNA1P78396 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CCNA1P78396 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.78□□□□□ -1.64
CCNA1P78396 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCNA1P78396 RN7SKP222-201ENST00000410651 315 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCNA1P78396 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.78□□□□□ -1.64
CCNA1P78396 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.78□□□□□ -1.64
CCNA1P78396 RBMY1KP-201ENST00000423480 476 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 IPMKP1-201ENST00000425988 855 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 AL050321.1-201ENST00000432363 400 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.78□□□□□ -1.64
CCNA1P78396 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.78□□□□□ -1.64
CCNA1P78396 AL157884.3-201ENST00000448273 1184 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 AL133547.1-201ENST00000448546 220 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 FCF1P7-201ENST00000451185 558 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 EIF2S2P5-201ENST00000457635 968 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 RPL23AP2-201ENST00000471227 466 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 AC007688.1-201ENST00000475592 759 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 RPL23AP37-201ENST00000479658 549 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.78□□□□□ -1.64
CCNA1P78396 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.78□□□□□ -1.64
CCNA1P78396 SEC11B-201ENST00000518383 499 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.78□□□□□ -1.64
CCNA1P78396 AC120057.2-201ENST00000571520 271 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 MIR4716-201ENST00000579628 84 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms