Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
RPL39P62891 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC2.6□□□□□ -1.99
RPL39P62891 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
RPL39P62891 AC008725.1-201ENST00000605123 2263 ntBASIC2.59□□□□□ -1.99
RPL39P62891 DDX18P3-201ENST00000404856 2007 ntBASIC2.59□□□□□ -1.99
RPL39P62891 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RPL39P62891 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RPL39P62891 RNA5-8SP7-201ENST00000363443 155 ntBASIC2.59□□□□□ -1.99
RPL39P62891 RNA5SP130-201ENST00000364431 114 ntBASIC2.59□□□□□ -1.99
RPL39P62891 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.59□□□□□ -1.99
RPL39P62891 RNA5SP424-201ENST00000390988 115 ntBASIC2.59□□□□□ -1.99
RPL39P62891 U3.22-201ENST00000391120 215 ntBASIC2.59□□□□□ -1.99
RPL39P62891 AC073136.2-201ENST00000417282 849 ntBASIC2.59□□□□□ -1.99
RPL39P62891 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.59□□□□□ -1.99
RPL39P62891 AC074367.1-201ENST00000438685 1125 ntBASIC2.59□□□□□ -1.99
RPL39P62891 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.59□□□□□ -1.99
RPL39P62891 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.59□□□□□ -1.99
RPL39P62891 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC2.59□□□□□ -1.99
RPL39P62891 AC105137.1-201ENST00000484355 562 ntBASIC2.59□□□□□ -1.99
RPL39P62891 RPL32P9-201ENST00000487963 407 ntBASIC2.59□□□□□ -1.99
RPL39P62891 RPL23AP73-201ENST00000492507 471 ntBASIC2.59□□□□□ -1.99
RPL39P62891 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.59□□□□□ -1.99
RPL39P62891 AC093840.1-201ENST00000511599 336 ntBASIC2.59□□□□□ -1.99
RPL39P62891 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.59□□□□□ -1.99
RPL39P62891 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC2.59□□□□□ -1.99
RPL39P62891 AL121766.1-201ENST00000547436 487 ntBASIC2.59□□□□□ -1.99
RPL39P62891 AC063949.1-201ENST00000552900 865 ntBASIC2.59□□□□□ -1.99
RPL39P62891 TGIF1P1-201ENST00000558095 802 ntBASIC2.59□□□□□ -1.99
RPL39P62891 AL109741.3-201ENST00000561748 592 ntBASIC2.59□□□□□ -1.99
RPL39P62891 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC2.59□□□□□ -1.99
RPL39P62891 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC2.59□□□□□ -1.99
RPL39P62891 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.59□□□□□ -1.99
RPL39P62891 AC115621.1-201ENST00000604653 858 ntBASIC2.59□□□□□ -1.99
RPL39P62891 AL356218.2-201ENST00000605264 187 ntBASIC2.59□□□□□ -1.99
RPL39P62891 ARF4P1-201ENST00000605447 541 ntBASIC2.59□□□□□ -1.99
RPL39P62891 AC019193.2-201ENST00000610012 634 ntBASIC2.59□□□□□ -1.99
RPL39P62891 AL645927.2-201ENST00000618350 349 ntBASIC2.59□□□□□ -1.99
RPL39P62891 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RPL39P62891 PDCD6IPP1-202ENST00000622242 1064 ntBASIC2.59□□□□□ -1.99
RPL39P62891 AC020978.9-201ENST00000624380 1141 ntBASIC2.59□□□□□ -1.99
RPL39P62891 CDRT1-208ENST00000630868 794 ntBASIC2.59□□□□□ -1.99
RPL39P62891 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RPL39P62891 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.59□□□□□ -2
RPL39P62891 MAPK10-372ENST00000641954 3413 ntBASIC2.59□□□□□ -2
RPL39P62891 AC007656.2-201ENST00000624902 4547 ntBASIC2.59□□□□□ -2
RPL39P62891 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.59□□□□□ -2
RPL39P62891 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RPL39P62891 RNU4-39P-201ENST00000362455 127 ntBASIC2.58□□□□□ -2
RPL39P62891 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.58□□□□□ -2
RPL39P62891 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.58□□□□□ -2
RPL39P62891 AL450992.3-201ENST00000413192 568 ntBASIC2.58□□□□□ -2
RPL39P62891 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.58□□□□□ -2
RPL39P62891 AL691447.1-201ENST00000419456 387 ntBASIC2.58□□□□□ -2
RPL39P62891 RPS27AP7-201ENST00000422792 455 ntBASIC2.58□□□□□ -2
RPL39P62891 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC2.58□□□□□ -2
RPL39P62891 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.58□□□□□ -2
RPL39P62891 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.58□□□□□ -2
RPL39P62891 EXTL2P1-201ENST00000446218 416 ntBASIC2.58□□□□□ -2
RPL39P62891 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.58□□□□□ -2
RPL39P62891 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.58□□□□□ -2
RPL39P62891 NDUFA12P1-201ENST00000455914 406 ntBASIC2.58□□□□□ -2
RPL39P62891 AC107015.1-201ENST00000466902 747 ntBASIC2.58□□□□□ -2
RPL39P62891 RPL23AP14-201ENST00000468281 468 ntBASIC2.58□□□□□ -2
RPL39P62891 RPS4XP15-201ENST00000489210 795 ntBASIC2.58□□□□□ -2
RPL39P62891 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.58□□□□□ -2
RPL39P62891 HMGB3P14-201ENST00000494195 599 ntBASIC2.58□□□□□ -2
RPL39P62891 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC2.58□□□□□ -2
RPL39P62891 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.58□□□□□ -2
RPL39P62891 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
RPL39P62891 TBCA-203ENST00000517679 545 ntTSL 3 BASIC2.58□□□□□ -2
RPL39P62891 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.58□□□□□ -2
RPL39P62891 AP000859.1-201ENST00000525536 307 ntBASIC2.58□□□□□ -2
RPL39P62891 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.58□□□□□ -2
RPL39P62891 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC2.58□□□□□ -2
RPL39P62891 AC011602.1-201ENST00000546484 331 ntBASIC2.58□□□□□ -2
RPL39P62891 AC091515.1-201ENST00000548110 679 ntBASIC2.58□□□□□ -2
RPL39P62891 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.58□□□□□ -2
RPL39P62891 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.58□□□□□ -2
RPL39P62891 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC2.58□□□□□ -2
RPL39P62891 MIR4644-201ENST00000579929 84 ntBASIC2.58□□□□□ -2
RPL39P62891 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.58□□□□□ -2
RPL39P62891 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.58□□□□□ -2
RPL39P62891 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.58□□□□□ -2
RPL39P62891 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC2.58□□□□□ -2
RPL39P62891 AC022960.2-201ENST00000616300 666 ntBASIC2.58□□□□□ -2
RPL39P62891 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC2.58□□□□□ -2
RPL39P62891 LGI1-209ENST00000627699 664 ntTSL 3 BASIC2.58□□□□□ -2
RPL39P62891 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.58□□□□□ -2
RPL39P62891 AF001550.2-201ENST00000636643 217 ntBASIC2.58□□□□□ -2
RPL39P62891 AL732372.2-225ENST00000642124 456 ntBASIC2.58□□□□□ -2
RPL39P62891 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RPL39P62891 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
RPL39P62891 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RPL39P62891 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
RPL39P62891 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RPL39P62891 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RPL39P62891 MIR30E-201ENST00000362104 92 ntBASIC2.57□□□□□ -2
RPL39P62891 RNA5SP42-201ENST00000364278 115 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms