Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 ARF4P4-201ENST00000439608 520 ntBASIC3.84□□□□□ -1.79
LMO4P61968 RPL34P26-201ENST00000445636 354 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 AC004022.1-201ENST00000447766 1066 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 AL591623.2-201ENST00000449978 222 ntBASIC3.84□□□□□ -1.79
LMO4P61968 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 AC010468.1-201ENST00000461022 817 ntBASIC3.84□□□□□ -1.79
LMO4P61968 RPL7P48-201ENST00000461513 746 ntBASIC3.84□□□□□ -1.79
LMO4P61968 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 PRDX3P4-201ENST00000470828 747 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
LMO4P61968 AC134050.1-201ENST00000495088 933 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AC025459.1-201ENST00000504072 156 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.84□□□□□ -1.79
LMO4P61968 AC113420.1-201ENST00000507903 571 ntBASIC3.84□□□□□ -1.79
LMO4P61968 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LMO4P61968 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.84□□□□□ -1.79
LMO4P61968 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LMO4P61968 AL356057.1-201ENST00000533798 831 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.84□□□□□ -1.79
LMO4P61968 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.84□□□□□ -1.79
LMO4P61968 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 AGGF1P6-201ENST00000569213 976 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AC124283.4-201ENST00000581815 456 ntBASIC3.84□□□□□ -1.79
LMO4P61968 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.84□□□□□ -1.79
LMO4P61968 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.84□□□□□ -1.79
LMO4P61968 AC005034.4-201ENST00000603612 899 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AC009090.3-201ENST00000616553 565 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AC092140.2-201ENST00000618027 521 ntBASIC3.84□□□□□ -1.79
LMO4P61968 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.84□□□□□ -1.79
LMO4P61968 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.84□□□□□ -1.79
LMO4P61968 AC083865.1-201ENST00000636634 831 ntBASIC3.84□□□□□ -1.79
LMO4P61968 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LMO4P61968 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
LMO4P61968 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.84□□□□□ -1.79
LMO4P61968 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
LMO4P61968 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LMO4P61968 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.84□□□□□ -1.79
LMO4P61968 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LMO4P61968 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LMO4P61968 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LMO4P61968 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.84□□□□□ -1.8
LMO4P61968 AP000756.2-201ENST00000624168 2567 ntBASIC3.84□□□□□ -1.8
LMO4P61968 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LMO4P61968 CCT8P1-201ENST00000413611 1657 ntBASIC3.84□□□□□ -1.8
LMO4P61968 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
LMO4P61968 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.83□□□□□ -1.8
LMO4P61968 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
LMO4P61968 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC3.83□□□□□ -1.8
LMO4P61968 AL022322.2-201ENST00000624072 20397 ntBASIC3.83□□□□□ -1.8
LMO4P61968 AC107027.3-201ENST00000565095 3473 ntBASIC3.83□□□□□ -1.8
LMO4P61968 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
LMO4P61968 AC093719.1-202ENST00000392735 373 ntBASIC3.83□□□□□ -1.8
LMO4P61968 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.83□□□□□ -1.8
LMO4P61968 RNU4-25P-201ENST00000410569 230 ntBASIC3.83□□□□□ -1.8
LMO4P61968 UBE2V1P9-201ENST00000414760 368 ntBASIC3.83□□□□□ -1.8
LMO4P61968 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 RPS24P7-201ENST00000416921 246 ntBASIC3.83□□□□□ -1.8
LMO4P61968 AC016907.1-201ENST00000419483 435 ntBASIC3.83□□□□□ -1.8
LMO4P61968 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 EIF4HP2-201ENST00000424380 563 ntBASIC3.83□□□□□ -1.8
LMO4P61968 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.83□□□□□ -1.8
LMO4P61968 RPP40P1-201ENST00000426762 456 ntBASIC3.83□□□□□ -1.8
LMO4P61968 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.83□□□□□ -1.8
LMO4P61968 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.83□□□□□ -1.8
LMO4P61968 BTF3P6-201ENST00000448054 499 ntBASIC3.83□□□□□ -1.8
LMO4P61968 MTND1P29-201ENST00000448112 647 ntBASIC3.83□□□□□ -1.8
LMO4P61968 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.83□□□□□ -1.8
LMO4P61968 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 NIP7P2-201ENST00000485801 544 ntBASIC3.83□□□□□ -1.8
LMO4P61968 AC010486.2-201ENST00000505572 483 ntBASIC3.83□□□□□ -1.8
LMO4P61968 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.83□□□□□ -1.8
LMO4P61968 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.83□□□□□ -1.8
LMO4P61968 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.83□□□□□ -1.8
LMO4P61968 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 AP000827.1-201ENST00000527814 258 ntBASIC3.83□□□□□ -1.8
LMO4P61968 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 PARP1P2-201ENST00000556806 195 ntBASIC3.83□□□□□ -1.8
LMO4P61968 AC087477.6-201ENST00000559595 843 ntBASIC3.83□□□□□ -1.8
LMO4P61968 ZNF971P-201ENST00000562068 1249 ntBASIC3.83□□□□□ -1.8
LMO4P61968 AC010735.1-201ENST00000567305 1026 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms