Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB38P57729 AC069285.2-201ENST00000440210 275 ntBASIC3.83□□□□□ -1.8
RAB38P57729 AL357520.1-201ENST00000441557 453 ntBASIC3.83□□□□□ -1.8
RAB38P57729 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB38P57729 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB38P57729 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB38P57729 AC133473.1-201ENST00000455173 299 ntBASIC3.83□□□□□ -1.8
RAB38P57729 AC092691.2-201ENST00000461787 803 ntBASIC3.83□□□□□ -1.8
RAB38P57729 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.83□□□□□ -1.8
RAB38P57729 RN7SL271P-201ENST00000487601 295 ntBASIC3.83□□□□□ -1.8
RAB38P57729 AC025554.1-201ENST00000505641 188 ntBASIC3.83□□□□□ -1.8
RAB38P57729 VWA8P1-201ENST00000510889 176 ntBASIC3.83□□□□□ -1.8
RAB38P57729 CCNHP1-201ENST00000513311 678 ntBASIC3.83□□□□□ -1.8
RAB38P57729 RNA5SP154-201ENST00000516193 111 ntBASIC3.83□□□□□ -1.8
RAB38P57729 RNA5SP315-201ENST00000516340 116 ntBASIC3.83□□□□□ -1.8
RAB38P57729 RNA5SP312-201ENST00000517068 116 ntBASIC3.83□□□□□ -1.8
RAB38P57729 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB38P57729 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB38P57729 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB38P57729 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB38P57729 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB38P57729 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB38P57729 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB38P57729 AC007599.1-201ENST00000568688 1174 ntBASIC3.83□□□□□ -1.8
RAB38P57729 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB38P57729 AC015813.4-201ENST00000610469 179 ntBASIC3.83□□□□□ -1.8
RAB38P57729 MIR6867-201ENST00000610636 67 ntBASIC3.83□□□□□ -1.8
RAB38P57729 AC116447.1-201ENST00000613153 453 ntBASIC3.83□□□□□ -1.8
RAB38P57729 RMST_5.1-201ENST00000618704 126 ntBASIC3.83□□□□□ -1.8
RAB38P57729 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.83□□□□□ -1.8
RAB38P57729 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RAB38P57729 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB38P57729 PHKBP1-201ENST00000450951 1951 ntBASIC3.83□□□□□ -1.8
RAB38P57729 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB38P57729 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB38P57729 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB38P57729 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RAB38P57729 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB38P57729 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB38P57729 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB38P57729 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB38P57729 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RAB38P57729 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB38P57729 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAB38P57729 AC097504.1-201ENST00000515103 2415 ntBASIC3.82□□□□□ -1.8
RAB38P57729 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB38P57729 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAB38P57729 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAB38P57729 AC012020.1-201ENST00000624541 1728 ntBASIC3.82□□□□□ -1.8
RAB38P57729 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB38P57729 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAB38P57729 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RAB38P57729 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB38P57729 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RAB38P57729 RNU1-13P-201ENST00000384499 162 ntBASIC3.82□□□□□ -1.8
RAB38P57729 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.82□□□□□ -1.8
RAB38P57729 RNU6-603P-201ENST00000411403 107 ntBASIC3.82□□□□□ -1.8
RAB38P57729 TRIM60P17-201ENST00000415181 719 ntBASIC3.82□□□□□ -1.8
RAB38P57729 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.82□□□□□ -1.8
RAB38P57729 RPS27AP12-201ENST00000429552 465 ntBASIC3.82□□□□□ -1.8
RAB38P57729 AC091390.1-201ENST00000433904 331 ntBASIC3.82□□□□□ -1.8
RAB38P57729 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB38P57729 AC010469.1-201ENST00000463864 576 ntBASIC3.82□□□□□ -1.8
RAB38P57729 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB38P57729 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB38P57729 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.82□□□□□ -1.8
RAB38P57729 IGBP1P5-201ENST00000507524 1000 ntBASIC3.82□□□□□ -1.8
RAB38P57729 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.82□□□□□ -1.8
RAB38P57729 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
RAB38P57729 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.82□□□□□ -1.8
RAB38P57729 IGHV3-63-201ENST00000518422 341 ntBASIC3.82□□□□□ -1.8
RAB38P57729 MTND1P6-201ENST00000523621 946 ntBASIC3.82□□□□□ -1.8
RAB38P57729 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB38P57729 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.82□□□□□ -1.8
RAB38P57729 AC069240.1-201ENST00000548774 375 ntBASIC3.82□□□□□ -1.8
RAB38P57729 AC068446.3-201ENST00000555285 382 ntBASIC3.82□□□□□ -1.8
RAB38P57729 AC068714.1-201ENST00000559623 800 ntBASIC3.82□□□□□ -1.8
RAB38P57729 HMGB3P26-201ENST00000560051 582 ntBASIC3.82□□□□□ -1.8
RAB38P57729 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.82□□□□□ -1.8
RAB38P57729 AC010200.2-201ENST00000605098 235 ntBASIC3.82□□□□□ -1.8
RAB38P57729 AC092653.1-201ENST00000608509 531 ntBASIC3.82□□□□□ -1.8
RAB38P57729 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.82□□□□□ -1.8
RAB38P57729 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.82□□□□□ -1.8
RAB38P57729 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.82□□□□□ -1.8
RAB38P57729 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RAB38P57729 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.82□□□□□ -1.8
RAB38P57729 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB38P57729 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAB38P57729 AL445437.1-201ENST00000623157 3087 ntBASIC3.81□□□□□ -1.8
RAB38P57729 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
RAB38P57729 CASC19-261ENST00000641853 1638 ntBASIC3.81□□□□□ -1.8
RAB38P57729 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB38P57729 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB38P57729 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB38P57729 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB38P57729 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB38P57729 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB38P57729 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB38P57729 GCNT6-201ENST00000379591 934 ntBASIC3.81□□□□□ -1.8
RAB38P57729 RPL21P65-201ENST00000406094 466 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms