Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.45□□□□□ -1.54
GFRA1P56159 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
GFRA1P56159 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GFRA1P56159 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
GFRA1P56159 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GFRA1P56159 AC019072.1-201ENST00000604535 1551 ntBASIC5.45□□□□□ -1.54
GFRA1P56159 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
GFRA1P56159 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
GFRA1P56159 AC016583.1-201ENST00000624221 2431 ntBASIC5.45□□□□□ -1.54
GFRA1P56159 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
GFRA1P56159 AC093775.1-201ENST00000624154 1868 ntBASIC5.45□□□□□ -1.54
GFRA1P56159 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
GFRA1P56159 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.45□□□□□ -1.54
GFRA1P56159 AL662795.2-201ENST00000624252 3706 ntBASIC5.45□□□□□ -1.54
GFRA1P56159 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.44□□□□□ -1.54
GFRA1P56159 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.44□□□□□ -1.54
GFRA1P56159 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
GFRA1P56159 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
GFRA1P56159 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.44□□□□□ -1.54
GFRA1P56159 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
GFRA1P56159 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.44□□□□□ -1.54
GFRA1P56159 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
GFRA1P56159 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.44□□□□□ -1.54
GFRA1P56159 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
GFRA1P56159 OR4K15-201ENST00000305051 1216 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
GFRA1P56159 Y_RNA.573-201ENST00000384763 105 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 RN7SKP151-201ENST00000410230 316 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC116036.1-201ENST00000412199 367 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AL139413.1-201ENST00000421309 217 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.44□□□□□ -1.54
GFRA1P56159 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC245884.2-201ENST00000426257 404 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.44□□□□□ -1.54
GFRA1P56159 ISCA1P6-201ENST00000427740 390 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.44□□□□□ -1.54
GFRA1P56159 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GFRA1P56159 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 RPL12P11-201ENST00000439970 501 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
GFRA1P56159 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 FABP3P2-201ENST00000453169 399 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 MTND2P24-201ENST00000453434 806 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.44□□□□□ -1.54
GFRA1P56159 RN7SL269P-201ENST00000467795 305 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 PABPC1P3-201ENST00000469174 459 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AP000893.1-201ENST00000474462 794 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.44□□□□□ -1.54
GFRA1P56159 MTND1P3-201ENST00000484956 952 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC083795.1-201ENST00000491760 320 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC019235.1-201ENST00000503847 207 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.44□□□□□ -1.54
GFRA1P56159 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.44□□□□□ -1.54
GFRA1P56159 AC009646.1-201ENST00000510455 318 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.44□□□□□ -1.54
GFRA1P56159 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.44□□□□□ -1.54
GFRA1P56159 Y_RNA.667-201ENST00000516212 107 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.44□□□□□ -1.54
GFRA1P56159 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.44□□□□□ -1.54
GFRA1P56159 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 HMGB1P33-201ENST00000563485 527 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.44□□□□□ -1.54
GFRA1P56159 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.44□□□□□ -1.54
GFRA1P56159 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 AC007842.1-201ENST00000597336 2039 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.44□□□□□ -1.54
GFRA1P56159 BNIP3P33-201ENST00000598912 569 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 CKS1BP3-201ENST00000600888 237 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC027243.2-201ENST00000602530 724 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC245014.2-201ENST00000603689 287 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC246785.4-201ENST00000605374 287 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AL136131.3-201ENST00000607600 188 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 MLECP1-201ENST00000615893 709 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
GFRA1P56159 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
GFRA1P56159 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
GFRA1P56159 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
GFRA1P56159 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
GFRA1P56159 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.44□□□□□ -1.54
GFRA1P56159 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GFRA1P56159 AC012254.3-201ENST00000591183 2117 ntBASIC5.44□□□□□ -1.54
GFRA1P56159 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.44□□□□□ -1.54
GFRA1P56159 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA1P56159 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA1P56159 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms