Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.72□□□□□ -1.65
VCPP55072 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.71□□□□□ -1.65
VCPP55072 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VCPP55072 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VCPP55072 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VCPP55072 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.71□□□□□ -1.66
VCPP55072 HSPD1P16-201ENST00000402302 394 ntBASIC4.71□□□□□ -1.66
VCPP55072 RN7SKP222-201ENST00000410651 315 ntBASIC4.71□□□□□ -1.66
VCPP55072 RN7SKP159-201ENST00000410657 292 ntBASIC4.71□□□□□ -1.66
VCPP55072 RPL23AP38-201ENST00000423801 469 ntBASIC4.71□□□□□ -1.66
VCPP55072 YME1L1P1-201ENST00000429435 297 ntBASIC4.71□□□□□ -1.66
VCPP55072 AC092013.1-201ENST00000438795 332 ntBASIC4.71□□□□□ -1.66
VCPP55072 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VCPP55072 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.71□□□□□ -1.66
VCPP55072 AC006326.1-201ENST00000445465 787 ntBASIC4.71□□□□□ -1.66
VCPP55072 BUD31P2-201ENST00000449374 300 ntBASIC4.71□□□□□ -1.66
VCPP55072 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.71□□□□□ -1.66
VCPP55072 AC079804.1-201ENST00000461922 436 ntBASIC4.71□□□□□ -1.66
VCPP55072 AL132838.2-201ENST00000492041 314 ntBASIC4.71□□□□□ -1.66
VCPP55072 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.71□□□□□ -1.66
VCPP55072 STMN1P2-201ENST00000508435 439 ntBASIC4.71□□□□□ -1.66
VCPP55072 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.71□□□□□ -1.66
VCPP55072 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.71□□□□□ -1.66
VCPP55072 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.71□□□□□ -1.66
VCPP55072 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.71□□□□□ -1.66
VCPP55072 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.71□□□□□ -1.66
VCPP55072 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.71□□□□□ -1.66
VCPP55072 AC090181.2-201ENST00000602975 672 ntBASIC4.71□□□□□ -1.66
VCPP55072 AC012468.1-201ENST00000604888 430 ntBASIC4.71□□□□□ -1.66
VCPP55072 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.71□□□□□ -1.66
VCPP55072 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.71□□□□□ -1.66
VCPP55072 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VCPP55072 AC114546.3-201ENST00000623582 1734 ntBASIC4.71□□□□□ -1.66
VCPP55072 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
VCPP55072 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
VCPP55072 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VCPP55072 MIR383-201ENST00000362257 73 ntBASIC4.7□□□□□ -1.66
VCPP55072 RNU6-304P-201ENST00000364855 107 ntBASIC4.7□□□□□ -1.66
VCPP55072 RNU6-146P-201ENST00000384602 108 ntBASIC4.7□□□□□ -1.66
VCPP55072 SNRPFP1-201ENST00000414761 252 ntBASIC4.7□□□□□ -1.66
VCPP55072 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.7□□□□□ -1.66
VCPP55072 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.7□□□□□ -1.66
VCPP55072 AC048351.1-201ENST00000420064 602 ntBASIC4.7□□□□□ -1.66
VCPP55072 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VCPP55072 GOT2P5-201ENST00000433995 546 ntBASIC4.7□□□□□ -1.66
VCPP55072 MTCYBP29-201ENST00000436327 1006 ntBASIC4.7□□□□□ -1.66
VCPP55072 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VCPP55072 RPS27AP15-201ENST00000447672 466 ntBASIC4.7□□□□□ -1.66
VCPP55072 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VCPP55072 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VCPP55072 IFNWP4-201ENST00000453148 294 ntBASIC4.7□□□□□ -1.66
VCPP55072 MTND3P4-201ENST00000453537 303 ntBASIC4.7□□□□□ -1.66
VCPP55072 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.7□□□□□ -1.66
VCPP55072 AC091564.1-201ENST00000464563 479 ntBASIC4.7□□□□□ -1.66
VCPP55072 AC012158.1-204ENST00000483430 465 ntBASIC4.7□□□□□ -1.66
VCPP55072 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VCPP55072 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.7□□□□□ -1.66
VCPP55072 AC108475.1-201ENST00000507880 950 ntBASIC4.7□□□□□ -1.66
VCPP55072 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.7□□□□□ -1.66
VCPP55072 AC100770.1-201ENST00000532310 322 ntBASIC4.7□□□□□ -1.66
VCPP55072 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.7□□□□□ -1.66
VCPP55072 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.7□□□□□ -1.66
VCPP55072 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.7□□□□□ -1.66
VCPP55072 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.7□□□□□ -1.66
VCPP55072 AC008759.1-201ENST00000589783 983 ntBASIC4.7□□□□□ -1.66
VCPP55072 AC010201.1-201ENST00000605051 540 ntBASIC4.7□□□□□ -1.66
VCPP55072 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.7□□□□□ -1.66
VCPP55072 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.7□□□□□ -1.66
VCPP55072 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.7□□□□□ -1.66
VCPP55072 AC039056.2-201ENST00000622261 511 ntBASIC4.7□□□□□ -1.66
VCPP55072 OR2L1P-202ENST00000641567 1023 ntBASIC4.7□□□□□ -1.66
VCPP55072 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.7□□□□□ -1.66
VCPP55072 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VCPP55072 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VCPP55072 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.7□□□□□ -1.66
VCPP55072 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VCPP55072 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
VCPP55072 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.7□□□□□ -1.66
VCPP55072 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VCPP55072 AC009229.4-201ENST00000623854 1947 ntBASIC4.7□□□□□ -1.66
VCPP55072 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VCPP55072 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VCPP55072 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VCPP55072 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.69□□□□□ -1.66
VCPP55072 RNU1-63P-201ENST00000383902 164 ntBASIC4.69□□□□□ -1.66
VCPP55072 MIR483-201ENST00000385070 76 ntBASIC4.69□□□□□ -1.66
VCPP55072 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.69□□□□□ -1.66
VCPP55072 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.69□□□□□ -1.66
VCPP55072 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VCPP55072 SEC63P1-201ENST00000425785 1258 ntBASIC4.69□□□□□ -1.66
VCPP55072 NPM1P26-201ENST00000426339 738 ntBASIC4.69□□□□□ -1.66
VCPP55072 MTCO1P57-201ENST00000432182 261 ntBASIC4.69□□□□□ -1.66
VCPP55072 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.69□□□□□ -1.66
VCPP55072 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.69□□□□□ -1.66
VCPP55072 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.69□□□□□ -1.66
VCPP55072 AC146944.2-203ENST00000502493 354 ntBASIC4.69□□□□□ -1.66
VCPP55072 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.69□□□□□ -1.66
VCPP55072 AC139495.1-202ENST00000513164 354 ntBASIC4.69□□□□□ -1.66
VCPP55072 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.69□□□□□ -1.66
VCPP55072 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms