Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AL592148.2-201ENST00000612210 372 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AC007204.2-201ENST00000615022 616 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AC009704.2-201ENST00000618739 483 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 MIR8080-201ENST00000622224 89 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 SNORA17.5-201ENST00000630429 132 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 CYP4F35P-202ENST00000636121 390 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 AC087821.2-201ENST00000637086 450 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AC027290.2-201ENST00000623210 18662 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-1P43699 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX2-1P43699 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
NKX2-1P43699 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.01□□□□□ -1.77
NKX2-1P43699 MAPK10-286ENST00000641208 8747 ntBASIC4.01□□□□□ -1.77
NKX2-1P43699 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NKX2-1P43699 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NKX2-1P43699 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4□□□□□ -1.77
NKX2-1P43699 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NKX2-1P43699 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4□□□□□ -1.77
NKX2-1P43699 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NKX2-1P43699 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
NKX2-1P43699 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 SAGE4P-201ENST00000442271 3381 ntBASIC4□□□□□ -1.77
NKX2-1P43699 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NKX2-1P43699 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4□□□□□ -1.77
NKX2-1P43699 RNA5SP234-201ENST00000363916 119 ntBASIC4□□□□□ -1.77
NKX2-1P43699 RN7SKP15-201ENST00000364742 309 ntBASIC4□□□□□ -1.77
NKX2-1P43699 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NKX2-1P43699 RNA5SP339-201ENST00000390987 122 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AL049545.1-201ENST00000401856 572 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AL079342.2-201ENST00000403367 482 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4□□□□□ -1.77
NKX2-1P43699 AP000534.2-201ENST00000412729 568 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AC004022.2-201ENST00000413824 193 ntBASIC4□□□□□ -1.77
NKX2-1P43699 RPL21P108-201ENST00000413857 481 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4□□□□□ -1.77
NKX2-1P43699 GTF2IP5-201ENST00000414608 731 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4□□□□□ -1.77
NKX2-1P43699 PAICSP7-201ENST00000419829 962 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 AL133325.1-201ENST00000421090 382 ntBASIC4□□□□□ -1.77
NKX2-1P43699 GTF2IP2-201ENST00000424290 697 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AC093655.2-201ENST00000425735 631 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4□□□□□ -1.77
NKX2-1P43699 AC104843.2-201ENST00000427666 297 ntBASIC4□□□□□ -1.77
NKX2-1P43699 CNOT7P1-201ENST00000429006 852 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4□□□□□ -1.77
NKX2-1P43699 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4□□□□□ -1.77
NKX2-1P43699 MTCO2P20-201ENST00000437339 673 ntBASIC4□□□□□ -1.77
NKX2-1P43699 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4□□□□□ -1.77
NKX2-1P43699 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4□□□□□ -1.77
NKX2-1P43699 AL390119.1-201ENST00000440329 312 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AP000281.1-201ENST00000444036 316 ntBASIC4□□□□□ -1.77
NKX2-1P43699 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4□□□□□ -1.77
NKX2-1P43699 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4□□□□□ -1.77
NKX2-1P43699 AC112492.1-201ENST00000449607 712 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 NPM1P13-201ENST00000452663 865 ntBASIC4□□□□□ -1.77
NKX2-1P43699 IFNWP4-201ENST00000453148 294 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4□□□□□ -1.77
NKX2-1P43699 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4□□□□□ -1.77
NKX2-1P43699 DEFB109F-201ENST00000491870 277 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AC104971.1-201ENST00000495117 578 ntBASIC4□□□□□ -1.77
NKX2-1P43699 HMGB1P21-201ENST00000502313 581 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4□□□□□ -1.77
NKX2-1P43699 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4□□□□□ -1.77
NKX2-1P43699 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4□□□□□ -1.77
NKX2-1P43699 OR4C2P-201ENST00000530855 1064 ntBASIC4□□□□□ -1.77
NKX2-1P43699 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4□□□□□ -1.77
NKX2-1P43699 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4□□□□□ -1.77
NKX2-1P43699 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NKX2-1P43699 AC063949.1-201ENST00000552900 865 ntBASIC4□□□□□ -1.77
NKX2-1P43699 MTND4P33-201ENST00000556706 766 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AC090515.3-201ENST00000560431 315 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4□□□□□ -1.77
NKX2-1P43699 ATP5J2P6-201ENST00000565203 266 ntBASIC4□□□□□ -1.77
NKX2-1P43699 MIR3614-201ENST00000581261 86 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4□□□□□ -1.77
NKX2-1P43699 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 AC011477.5-201ENST00000586571 259 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 COX6CP4-201ENST00000605798 228 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 AC006386.1-201ENST00000619436 415 ntBASIC4□□□□□ -1.77
NKX2-1P43699 AC140113.4-201ENST00000622087 222 ntBASIC4□□□□□ -1.77
NKX2-1P43699 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
NKX2-1P43699 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NKX2-1P43699 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms