Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL450263.2-201ENST00000439400 589 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.31□□□□□ -1.72
TNFSF9P41273 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF9P41273 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF9P41273 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF9P41273 SAP18P1-201ENST00000512058 390 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.31□□□□□ -1.72
TNFSF9P41273 RNU6-352P-201ENST00000516908 107 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 AC023632.4-201ENST00000517783 191 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 NDUFA5P2-201ENST00000519723 344 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.31□□□□□ -1.72
TNFSF9P41273 OR5M7P-201ENST00000526140 972 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.31□□□□□ -1.72
TNFSF9P41273 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.31□□□□□ -1.72
TNFSF9P41273 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF9P41273 SNX6P1-201ENST00000601728 1224 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 AC012213.4-201ENST00000606457 354 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 MIR92B-201ENST00000607575 96 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.31□□□□□ -1.72
TNFSF9P41273 AC073530.2-201ENST00000623987 261 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF9P41273 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TNFSF9P41273 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF9P41273 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
TNFSF9P41273 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.31□□□□□ -1.72
TNFSF9P41273 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF9P41273 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF9P41273 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF9P41273 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF9P41273 AC016588.2-201ENST00000632484 3021 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 BTBD10P1-201ENST00000549824 1352 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 RNU1-85P-201ENST00000364127 164 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF9P41273 BMS1P3-201ENST00000372011 932 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 RNU6-213P-201ENST00000384051 104 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 SNORA68.2-201ENST00000391263 128 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF9P41273 MTCYBP7-201ENST00000419540 1134 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.3□□□□□ -1.72
TNFSF9P41273 CASP3P1-201ENST00000446037 609 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 Z95327.1-201ENST00000446082 482 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF9P41273 NPM1P29-201ENST00000483112 803 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 RNU6-319P-201ENST00000516025 108 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.3□□□□□ -1.72
TNFSF9P41273 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.3□□□□□ -1.72
TNFSF9P41273 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF9P41273 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF9P41273 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF9P41273 AP005901.4-201ENST00000577336 569 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.3□□□□□ -1.72
TNFSF9P41273 AC006130.2-201ENST00000586202 326 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 AL356863.1-201ENST00000623378 1080 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 AC124312.6-202ENST00000623624 418 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 CDRT1-208ENST00000630868 794 ntBASIC4.3□□□□□ -1.72
TNFSF9P41273 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF9P41273 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.3□□□□□ -1.72
TNFSF9P41273 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF9P41273 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF9P41273 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF9P41273 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
TNFSF9P41273 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF9P41273 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TNFSF9P41273 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TNFSF9P41273 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TNFSF9P41273 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFSF9P41273 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TNFSF9P41273 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFSF9P41273 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFSF9P41273 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TNFSF9P41273 RN7SKP202-201ENST00000410439 330 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 SETP15-201ENST00000412724 337 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 EIF4EP1-201ENST00000422311 642 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 BMS1P19-201ENST00000433925 393 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 BTG3P1-201ENST00000435859 716 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 VN1R25P-201ENST00000443385 738 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFSF9P41273 VN1R40P-201ENST00000455196 941 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 RN7SL132P-201ENST00000478131 296 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 PPIAP15-201ENST00000479662 484 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFSF9P41273 AC087369.1-201ENST00000520775 996 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 MTCO1P49-201ENST00000523429 802 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFSF9P41273 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.29□□□□□ -1.72
TNFSF9P41273 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFSF9P41273 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.29□□□□□ -1.72
TNFSF9P41273 BNIP3P33-201ENST00000598912 569 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 AC015726.1-201ENST00000602353 681 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 AC034229.5-201ENST00000624258 185 ntBASIC4.29□□□□□ -1.72
TNFSF9P41273 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.29□□□□□ -1.72
TNFSF9P41273 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.29□□□□□ -1.72
TNFSF9P41273 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TNFSF9P41273 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFSF9P41273 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFSF9P41273 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFSF9P41273 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFSF9P41273 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFSF9P41273 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TNFSF9P41273 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms