Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPB2P35606 LLPHP1-201ENST00000603571 367 ntBASIC5.18□□□□□ -1.58
COPB2P35606 BX322635.1-201ENST00000605804 496 ntBASIC5.18□□□□□ -1.58
COPB2P35606 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.18□□□□□ -1.58
COPB2P35606 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.18□□□□□ -1.58
COPB2P35606 AL445567.2-201ENST00000618935 498 ntBASIC5.18□□□□□ -1.58
COPB2P35606 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPB2P35606 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COPB2P35606 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPB2P35606 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPB2P35606 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
COPB2P35606 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.17□□□□□ -1.58
COPB2P35606 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPB2P35606 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.17□□□□□ -1.58
COPB2P35606 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPB2P35606 EIF2AP4-201ENST00000424793 1781 ntBASIC5.17□□□□□ -1.58
COPB2P35606 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPB2P35606 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPB2P35606 RNA5SP391-201ENST00000363456 119 ntBASIC5.17□□□□□ -1.58
COPB2P35606 RNA5SP366-201ENST00000365454 123 ntBASIC5.17□□□□□ -1.58
COPB2P35606 RNU6-98P-201ENST00000384173 107 ntBASIC5.17□□□□□ -1.58
COPB2P35606 RPS26P8-201ENST00000393490 348 ntBASIC5.17□□□□□ -1.58
COPB2P35606 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.17□□□□□ -1.58
COPB2P35606 NMNAT1P2-201ENST00000435192 860 ntBASIC5.17□□□□□ -1.58
COPB2P35606 NUTF2P3-201ENST00000448540 384 ntBASIC5.17□□□□□ -1.58
COPB2P35606 SNORD108-201ENST00000459332 71 ntBASIC5.17□□□□□ -1.58
COPB2P35606 UQCRHP4-201ENST00000471686 272 ntBASIC5.17□□□□□ -1.58
COPB2P35606 RPL21P103-201ENST00000479921 488 ntBASIC5.17□□□□□ -1.58
COPB2P35606 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.17□□□□□ -1.58
COPB2P35606 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.17□□□□□ -1.58
COPB2P35606 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.17□□□□□ -1.58
COPB2P35606 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.17□□□□□ -1.58
COPB2P35606 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.17□□□□□ -1.58
COPB2P35606 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.17□□□□□ -1.58
COPB2P35606 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.17□□□□□ -1.58
COPB2P35606 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.17□□□□□ -1.58
COPB2P35606 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB2P35606 AC018618.2-201ENST00000604770 446 ntBASIC5.17□□□□□ -1.58
COPB2P35606 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB2P35606 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB2P35606 AL162233.1-201ENST00000620014 944 ntBASIC5.17□□□□□ -1.58
COPB2P35606 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.17□□□□□ -1.58
COPB2P35606 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
COPB2P35606 ZNF33CP-201ENST00000432492 2030 ntBASIC5.17□□□□□ -1.58
COPB2P35606 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.17□□□□□ -1.58
COPB2P35606 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPB2P35606 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPB2P35606 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPB2P35606 AC018529.3-201ENST00000624212 2254 ntBASIC5.16□□□□□ -1.58
COPB2P35606 MAPK10-320ENST00000641462 6696 ntBASIC5.16□□□□□ -1.58
COPB2P35606 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPB2P35606 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COPB2P35606 RNA5SP479-201ENST00000364858 117 ntBASIC5.16□□□□□ -1.58
COPB2P35606 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.16□□□□□ -1.58
COPB2P35606 SNORA57.1-201ENST00000391227 145 ntBASIC5.16□□□□□ -1.58
COPB2P35606 HMGB1P10-201ENST00000395823 563 ntBASIC5.16□□□□□ -1.58
COPB2P35606 RPL23AP26-201ENST00000412728 464 ntBASIC5.16□□□□□ -1.58
COPB2P35606 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB2P35606 PRELID3BP11-201ENST00000414230 479 ntBASIC5.16□□□□□ -1.58
COPB2P35606 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.16□□□□□ -1.58
COPB2P35606 RAD23BP1-201ENST00000421404 1227 ntBASIC5.16□□□□□ -1.58
COPB2P35606 AC092832.1-201ENST00000422934 400 ntBASIC5.16□□□□□ -1.58
COPB2P35606 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB2P35606 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.16□□□□□ -1.58
COPB2P35606 RPL23AP43-201ENST00000446445 471 ntBASIC5.16□□□□□ -1.58
COPB2P35606 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB2P35606 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB2P35606 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB2P35606 RNA5SP103-201ENST00000459503 118 ntBASIC5.16□□□□□ -1.58
COPB2P35606 AC091167.1-201ENST00000492017 396 ntBASIC5.16□□□□□ -1.58
COPB2P35606 PPM1AP1-201ENST00000502740 1135 ntBASIC5.16□□□□□ -1.58
COPB2P35606 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB2P35606 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB2P35606 MRPL49P2-201ENST00000521066 465 ntBASIC5.16□□□□□ -1.58
COPB2P35606 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.16□□□□□ -1.58
COPB2P35606 AP003730.1-201ENST00000524605 285 ntBASIC5.16□□□□□ -1.58
COPB2P35606 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB2P35606 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB2P35606 AC023762.1-201ENST00000603280 584 ntBASIC5.16□□□□□ -1.58
COPB2P35606 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.16□□□□□ -1.58
COPB2P35606 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.16□□□□□ -1.58
COPB2P35606 AC105429.2-201ENST00000610567 517 ntBASIC5.16□□□□□ -1.58
COPB2P35606 AL158196.1-201ENST00000616786 434 ntBASIC5.16□□□□□ -1.58
COPB2P35606 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.16□□□□□ -1.58
COPB2P35606 uc_338.13-201ENST00000618243 179 ntBASIC5.16□□□□□ -1.58
COPB2P35606 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COPB2P35606 AC022106.2-201ENST00000620114 757 ntBASIC5.16□□□□□ -1.58
COPB2P35606 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
COPB2P35606 MIR3653-201ENST00000625572 110 ntBASIC5.16□□□□□ -1.58
COPB2P35606 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.16□□□□□ -1.58
COPB2P35606 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.16□□□□□ -1.58
COPB2P35606 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPB2P35606 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPB2P35606 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COPB2P35606 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPB2P35606 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPB2P35606 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.15□□□□□ -1.58
COPB2P35606 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COPB2P35606 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
COPB2P35606 OR52E6-202ENST00000379946 954 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms