Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPA3P35244 AMZ2P2-201ENST00000406819 1057 ntBASIC4.03□□□□□ -1.76
RPA3P35244 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.03□□□□□ -1.76
RPA3P35244 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.03□□□□□ -1.76
RPA3P35244 AL590806.1-201ENST00000415818 853 ntBASIC4.03□□□□□ -1.76
RPA3P35244 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.03□□□□□ -1.76
RPA3P35244 AC099063.2-201ENST00000446360 662 ntBASIC4.03□□□□□ -1.76
RPA3P35244 AL500522.2-201ENST00000448562 343 ntBASIC4.03□□□□□ -1.76
RPA3P35244 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.03□□□□□ -1.76
RPA3P35244 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.03□□□□□ -1.76
RPA3P35244 AC105918.1-201ENST00000474399 838 ntBASIC4.03□□□□□ -1.76
RPA3P35244 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.03□□□□□ -1.76
RPA3P35244 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
RPA3P35244 AC146944.2-203ENST00000502493 354 ntBASIC4.03□□□□□ -1.76
RPA3P35244 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.03□□□□□ -1.76
RPA3P35244 AC139495.1-202ENST00000513164 354 ntBASIC4.03□□□□□ -1.76
RPA3P35244 RN7SKP122-201ENST00000515923 296 ntBASIC4.03□□□□□ -1.76
RPA3P35244 IGKV2D-10-201ENST00000520194 281 ntBASIC4.03□□□□□ -1.76
RPA3P35244 MRPL49P2-201ENST00000521066 465 ntBASIC4.03□□□□□ -1.76
RPA3P35244 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.03□□□□□ -1.76
RPA3P35244 CYCSP29-201ENST00000533731 318 ntBASIC4.03□□□□□ -1.76
RPA3P35244 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.03□□□□□ -1.76
RPA3P35244 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.03□□□□□ -1.76
RPA3P35244 AC069366.1-201ENST00000583159 838 ntBASIC4.03□□□□□ -1.76
RPA3P35244 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.03□□□□□ -1.76
RPA3P35244 AC023043.4-201ENST00000612081 449 ntBASIC4.03□□□□□ -1.76
RPA3P35244 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.03□□□□□ -1.76
RPA3P35244 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RPA3P35244 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.03□□□□□ -1.76
RPA3P35244 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.03□□□□□ -1.76
RPA3P35244 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPA3P35244 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.02□□□□□ -1.77
RPA3P35244 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPA3P35244 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPA3P35244 OR52B1P-201ENST00000316506 909 ntBASIC4.02□□□□□ -1.77
RPA3P35244 RNU1-18P-201ENST00000363062 164 ntBASIC4.02□□□□□ -1.77
RPA3P35244 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPA3P35244 RNU6-178P-201ENST00000384631 104 ntBASIC4.02□□□□□ -1.77
RPA3P35244 AC093719.1-202ENST00000392735 373 ntBASIC4.02□□□□□ -1.77
RPA3P35244 ATP5F1P2-201ENST00000398143 760 ntBASIC4.02□□□□□ -1.77
RPA3P35244 AC108032.1-201ENST00000416706 207 ntBASIC4.02□□□□□ -1.77
RPA3P35244 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.02□□□□□ -1.77
RPA3P35244 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.02□□□□□ -1.77
RPA3P35244 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.02□□□□□ -1.77
RPA3P35244 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.02□□□□□ -1.77
RPA3P35244 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPA3P35244 MTCYBP14-201ENST00000457471 715 ntBASIC4.02□□□□□ -1.77
RPA3P35244 RNA5SP246-201ENST00000458909 119 ntBASIC4.02□□□□□ -1.77
RPA3P35244 STRADBP1-201ENST00000478954 1281 ntBASIC4.02□□□□□ -1.77
RPA3P35244 RN7SL271P-201ENST00000487601 295 ntBASIC4.02□□□□□ -1.77
RPA3P35244 RPL7P24-201ENST00000493052 752 ntBASIC4.02□□□□□ -1.77
RPA3P35244 RPS27AP13-201ENST00000498403 237 ntBASIC4.02□□□□□ -1.77
RPA3P35244 AC113398.2-201ENST00000507630 558 ntBASIC4.02□□□□□ -1.77
RPA3P35244 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPA3P35244 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.02□□□□□ -1.77
RPA3P35244 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.02□□□□□ -1.77
RPA3P35244 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.02□□□□□ -1.77
RPA3P35244 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.02□□□□□ -1.77
RPA3P35244 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
RPA3P35244 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RPA3P35244 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
RPA3P35244 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.02□□□□□ -1.77
RPA3P35244 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
RPA3P35244 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPA3P35244 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPA3P35244 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPA3P35244 LINC00561-201ENST00000565815 2738 ntBASIC4.01□□□□□ -1.77
RPA3P35244 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RPA3P35244 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RPA3P35244 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RPA3P35244 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RPA3P35244 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.01□□□□□ -1.77
RPA3P35244 AC116667.1-201ENST00000604855 2072 ntBASIC4.01□□□□□ -1.77
RPA3P35244 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RPA3P35244 OR11H4-201ENST00000315409 1082 ntBASIC4.01□□□□□ -1.77
RPA3P35244 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RPA3P35244 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.01□□□□□ -1.77
RPA3P35244 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.01□□□□□ -1.77
RPA3P35244 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.01□□□□□ -1.77
RPA3P35244 RN7SL604P-201ENST00000492589 296 ntBASIC4.01□□□□□ -1.77
RPA3P35244 RPL29P14-201ENST00000495837 428 ntBASIC4.01□□□□□ -1.77
RPA3P35244 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.01□□□□□ -1.77
RPA3P35244 AC005798.1-201ENST00000513715 387 ntBASIC4.01□□□□□ -1.77
RPA3P35244 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.01□□□□□ -1.77
RPA3P35244 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.01□□□□□ -1.77
RPA3P35244 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.01□□□□□ -1.77
RPA3P35244 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.01□□□□□ -1.77
RPA3P35244 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.01□□□□□ -1.77
RPA3P35244 ELOCP28-201ENST00000590044 317 ntBASIC4.01□□□□□ -1.77
RPA3P35244 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.01□□□□□ -1.77
RPA3P35244 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.01□□□□□ -1.77
RPA3P35244 AL591424.2-201ENST00000617023 128 ntBASIC4.01□□□□□ -1.77
RPA3P35244 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.01□□□□□ -1.77
RPA3P35244 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RPA3P35244 AL356317.1-201ENST00000396110 1436 ntBASIC4.01□□□□□ -1.77
RPA3P35244 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RPA3P35244 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4□□□□□ -1.77
RPA3P35244 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RPA3P35244 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4□□□□□ -1.77
RPA3P35244 AC006504.1-201ENST00000562493 3666 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms