Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.17□□□□□ -1.58
CIITAP33076 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CIITAP33076 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CIITAP33076 CYCSP42-201ENST00000450823 238 ntBASIC5.17□□□□□ -1.58
CIITAP33076 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.17□□□□□ -1.58
CIITAP33076 AL445433.1-201ENST00000457507 257 ntBASIC5.17□□□□□ -1.58
CIITAP33076 CYCSP34-201ENST00000458172 304 ntBASIC5.17□□□□□ -1.58
CIITAP33076 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.17□□□□□ -1.58
CIITAP33076 RN7SL346P-201ENST00000491561 294 ntBASIC5.17□□□□□ -1.58
CIITAP33076 RPS27AP16-201ENST00000492222 470 ntBASIC5.17□□□□□ -1.58
CIITAP33076 TPT1P3-201ENST00000492841 512 ntBASIC5.17□□□□□ -1.58
CIITAP33076 AC134050.1-201ENST00000495088 933 ntBASIC5.17□□□□□ -1.58
CIITAP33076 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.17□□□□□ -1.58
CIITAP33076 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.17□□□□□ -1.58
CIITAP33076 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.17□□□□□ -1.58
CIITAP33076 AC138938.1-201ENST00000515431 782 ntBASIC5.17□□□□□ -1.58
CIITAP33076 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.17□□□□□ -1.58
CIITAP33076 RNU6-1004P-201ENST00000516584 111 ntBASIC5.17□□□□□ -1.58
CIITAP33076 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CIITAP33076 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CIITAP33076 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.17□□□□□ -1.58
CIITAP33076 CYB5AP5-201ENST00000549779 389 ntBASIC5.17□□□□□ -1.58
CIITAP33076 AL132657.2-201ENST00000564417 358 ntBASIC5.17□□□□□ -1.58
CIITAP33076 MIR4715-201ENST00000584117 79 ntBASIC5.17□□□□□ -1.58
CIITAP33076 AC012254.4-201ENST00000588843 273 ntBASIC5.17□□□□□ -1.58
CIITAP33076 GAS5-AS1-201ENST00000602767 694 ntBASIC5.17□□□□□ -1.58
CIITAP33076 COX6CP4-201ENST00000605798 228 ntBASIC5.17□□□□□ -1.58
CIITAP33076 AC104985.3-201ENST00000623479 597 ntBASIC5.17□□□□□ -1.58
CIITAP33076 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.17□□□□□ -1.58
CIITAP33076 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.17□□□□□ -1.58
CIITAP33076 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.17□□□□□ -1.58
CIITAP33076 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CIITAP33076 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.17□□□□□ -1.58
CIITAP33076 AC009229.4-201ENST00000623854 1947 ntBASIC5.17□□□□□ -1.58
CIITAP33076 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CIITAP33076 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.17□□□□□ -1.58
CIITAP33076 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CIITAP33076 PHKBP1-201ENST00000450951 1951 ntBASIC5.16□□□□□ -1.58
CIITAP33076 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.16□□□□□ -1.58
CIITAP33076 AL133268.1-201ENST00000405676 1401 ntBASIC5.16□□□□□ -1.58
CIITAP33076 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CIITAP33076 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CIITAP33076 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CIITAP33076 RNU1-32P-201ENST00000363937 159 ntBASIC5.16□□□□□ -1.58
CIITAP33076 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CIITAP33076 AL603865.2-201ENST00000401679 213 ntBASIC5.16□□□□□ -1.58
CIITAP33076 MTND4P13-201ENST00000402078 1023 ntBASIC5.16□□□□□ -1.58
CIITAP33076 NCSTNP1-201ENST00000406229 144 ntBASIC5.16□□□□□ -1.58
CIITAP33076 AC023128.2-201ENST00000420880 1223 ntBASIC5.16□□□□□ -1.58
CIITAP33076 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CIITAP33076 AP001324.1-201ENST00000428553 399 ntBASIC5.16□□□□□ -1.58
CIITAP33076 H2AFZP6-201ENST00000444403 394 ntBASIC5.16□□□□□ -1.58
CIITAP33076 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.16□□□□□ -1.58
CIITAP33076 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.16□□□□□ -1.58
CIITAP33076 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.16□□□□□ -1.58
CIITAP33076 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CIITAP33076 AC025459.1-201ENST00000504072 156 ntBASIC5.16□□□□□ -1.58
CIITAP33076 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.16□□□□□ -1.58
CIITAP33076 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.16□□□□□ -1.58
CIITAP33076 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.16□□□□□ -1.58
CIITAP33076 OR10V3P-201ENST00000525712 725 ntBASIC5.16□□□□□ -1.58
CIITAP33076 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.16□□□□□ -1.58
CIITAP33076 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.16□□□□□ -1.58
CIITAP33076 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.16□□□□□ -1.58
CIITAP33076 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.16□□□□□ -1.58
CIITAP33076 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.16□□□□□ -1.58
CIITAP33076 RPL12P25-202ENST00000598100 674 ntBASIC5.16□□□□□ -1.58
CIITAP33076 AC093765.1-201ENST00000603758 881 ntBASIC5.16□□□□□ -1.58
CIITAP33076 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.16□□□□□ -1.58
CIITAP33076 MIR6748-201ENST00000610433 71 ntBASIC5.16□□□□□ -1.58
CIITAP33076 AC007342.8-201ENST00000623278 678 ntBASIC5.16□□□□□ -1.58
CIITAP33076 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CIITAP33076 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.16□□□□□ -1.58
CIITAP33076 AC009313.2-201ENST00000417893 1941 ntBASIC5.16□□□□□ -1.58
CIITAP33076 HSPD1P11-201ENST00000508643 1702 ntBASIC5.16□□□□□ -1.58
CIITAP33076 AC015813.6-201ENST00000624409 5808 ntBASIC5.16□□□□□ -1.58
CIITAP33076 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.16□□□□□ -1.58
CIITAP33076 AL355578.1-201ENST00000607405 1328 ntBASIC5.16□□□□□ -1.58
CIITAP33076 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CIITAP33076 RAD17P1-201ENST00000418130 2042 ntBASIC5.16□□□□□ -1.58
CIITAP33076 SALL4P2-201ENST00000423288 2910 ntBASIC5.16□□□□□ -1.58
CIITAP33076 LINC00622-201ENST00000562811 1570 ntBASIC5.16□□□□□ -1.58
CIITAP33076 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CIITAP33076 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CIITAP33076 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CIITAP33076 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CIITAP33076 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CIITAP33076 VN2R3P-201ENST00000422626 1412 ntBASIC5.15□□□□□ -1.58
CIITAP33076 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CIITAP33076 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.15□□□□□ -1.58
CIITAP33076 AL731566.1-201ENST00000620490 1937 ntBASIC5.15□□□□□ -1.58
CIITAP33076 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CIITAP33076 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CIITAP33076 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CIITAP33076 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CIITAP33076 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CIITAP33076 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CIITAP33076 RNU5B-1-201ENST00000363286 116 ntBASIC5.15□□□□□ -1.59
CIITAP33076 RNU6-304P-201ENST00000364855 107 ntBASIC5.15□□□□□ -1.59
CIITAP33076 RNU6-178P-201ENST00000384631 104 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms