Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RPL36AP13-201ENST00000457490 317 ntBASIC4.33□□□□□ -1.72
HOXA9P31269 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA9P31269 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXA9P31269 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA9P31269 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HOXA9P31269 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXA9P31269 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXA9P31269 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA9P31269 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA9P31269 AC018552.3-201ENST00000567416 561 ntBASIC4.33□□□□□ -1.72
HOXA9P31269 AC053481.3-201ENST00000577881 843 ntBASIC4.33□□□□□ -1.72
HOXA9P31269 AP005212.4-201ENST00000614206 710 ntBASIC4.33□□□□□ -1.72
HOXA9P31269 AL158196.1-201ENST00000616786 434 ntBASIC4.33□□□□□ -1.72
HOXA9P31269 MIR7154-201ENST00000620673 73 ntBASIC4.33□□□□□ -1.72
HOXA9P31269 MIR6715B-201ENST00000637172 77 ntBASIC4.33□□□□□ -1.72
HOXA9P31269 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA9P31269 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA9P31269 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
HOXA9P31269 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HOXA9P31269 NEAT1-202ENST00000501122 22743 ntBASIC4.33□□□□□ -1.72
HOXA9P31269 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA9P31269 AC114546.3-201ENST00000623582 1734 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA9P31269 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA9P31269 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA9P31269 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA9P31269 AC105074.1-201ENST00000623380 3095 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA9P31269 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA9P31269 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HOXA9P31269 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXA9P31269 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA9P31269 AC006011.1-201ENST00000442758 349 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA9P31269 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXA9P31269 RPS27AP15-201ENST00000447672 466 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 FCF1P7-201ENST00000451185 558 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AC091564.1-201ENST00000464563 479 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AC091917.2-201ENST00000505002 744 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA9P31269 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA9P31269 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA9P31269 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXA9P31269 PHBP17-201ENST00000528576 541 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXA9P31269 MIR5684-201ENST00000585074 65 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AC005255.1-201ENST00000593748 216 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AC123786.2-201ENST00000603459 275 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AC116447.1-201ENST00000613153 453 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AC039056.2-201ENST00000622261 511 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AP006248.2-201ENST00000623309 592 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AP003400.2-201ENST00000624036 666 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 AC112200.1-201ENST00000625015 234 ntBASIC4.32□□□□□ -1.72
HOXA9P31269 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA9P31269 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA9P31269 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA9P31269 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXA9P31269 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXA9P31269 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXA9P31269 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXA9P31269 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXA9P31269 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXA9P31269 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HOXA9P31269 AC106871.1-201ENST00000568324 3102 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 AC016588.2-201ENST00000632484 3021 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXA9P31269 AC233968.1-201ENST00000611212 1300 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 RNU6-1331P-201ENST00000363658 106 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXA9P31269 MIR670-201ENST00000390142 98 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXA9P31269 RNA5SP44-201ENST00000410446 133 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 RNU4-6P-201ENST00000410804 122 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 AL450992.3-201ENST00000413192 568 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 AL691449.1-201ENST00000426570 421 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXA9P31269 AL358232.1-201ENST00000448030 501 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 RPL7P15-201ENST00000461190 712 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 RPL7L1P8-201ENST00000469911 741 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 AC007688.1-201ENST00000475592 759 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 AC037198.2-201ENST00000478845 733 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 RNA5SP143-201ENST00000516936 115 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 IGLV3-26-201ENST00000520756 302 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 AC100770.1-201ENST00000532310 322 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXA9P31269 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXA9P31269 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXA9P31269 AC084033.1-201ENST00000550830 633 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.31□□□□□ -1.72
HOXA9P31269 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXA9P31269 AC112230.1-201ENST00000604342 547 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXA9P31269 AC023509.5-201ENST00000617434 807 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXA9P31269 AC055839.1-201ENST00000634467 498 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 Z73965.1-201ENST00000623412 2297 ntBASIC4.31□□□□□ -1.72
HOXA9P31269 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HOXA9P31269 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms