Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.23□□□□□ -1.73
PTPN6P29350 RNU2-17P-201ENST00000410290 190 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 XKRYP4-201ENST00000414395 483 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 DYNLL1P7-201ENST00000429273 258 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 MTCYBP21-201ENST00000443300 1113 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 RPL23AP43-201ENST00000446445 471 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN6P29350 XKRYP5-201ENST00000449659 483 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 NDUFS5P3-201ENST00000450668 321 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 DDX39BP2-208ENST00000453923 258 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 NDUFA12P1-201ENST00000455914 406 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN6P29350 AC079804.1-201ENST00000461922 436 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN6P29350 AC104687.1-201ENST00000485829 412 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 HMGB1P21-201ENST00000502313 581 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN6P29350 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN6P29350 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.23□□□□□ -1.73
PTPN6P29350 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.23□□□□□ -1.73
PTPN6P29350 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN6P29350 RAB9BP1-201ENST00000519581 626 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN6P29350 AP002812.4-201ENST00000532139 286 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.23□□□□□ -1.73
PTPN6P29350 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN6P29350 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
PTPN6P29350 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN6P29350 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN6P29350 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN6P29350 AL121834.1-201ENST00000572284 509 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 AL160290.3-201ENST00000604869 165 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 AL035461.2-201ENST00000619201 524 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 AC007546.2-201ENST00000623996 360 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 MIR7641-1-201ENST00000627518 61 ntBASIC4.23□□□□□ -1.73
PTPN6P29350 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN6P29350 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN6P29350 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN6P29350 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN6P29350 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN6P29350 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN6P29350 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN6P29350 AC027290.2-201ENST00000623210 18662 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN6P29350 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTPN6P29350 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN6P29350 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN6P29350 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN6P29350 SNORA71.2-201ENST00000364941 134 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 RNA5SP332-201ENST00000391063 115 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 GLULP6-201ENST00000399502 913 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 CENPIP1-201ENST00000425713 902 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 AL031736.2-201ENST00000426573 787 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN6P29350 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN6P29350 ELOCP3-201ENST00000439303 348 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN6P29350 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN6P29350 AL645939.1-201ENST00000453429 797 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 RPS20P4-201ENST00000461659 355 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN6P29350 AC108729.2-201ENST00000476543 840 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN6P29350 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN6P29350 AC093720.1-201ENST00000505681 714 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 AC111000.3-201ENST00000508057 576 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 PPBPP1-201ENST00000510807 373 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN6P29350 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN6P29350 RNA5SP497-201ENST00000516081 97 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PTPN6P29350 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
PTPN6P29350 AC069240.1-201ENST00000548774 375 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 OR4U1P-201ENST00000554958 912 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN6P29350 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN6P29350 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 MTND4LP24-201ENST00000572277 291 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN6P29350 AC005034.4-201ENST00000603612 899 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 AL133338.2-201ENST00000604292 736 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN6P29350 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN6P29350 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTPN6P29350 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN6P29350 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PTPN6P29350 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN6P29350 AL132640.2-201ENST00000559968 1698 ntBASIC4.22□□□□□ -1.73
PTPN6P29350 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.21□□□□□ -1.73
PTPN6P29350 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.21□□□□□ -1.73
PTPN6P29350 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PTPN6P29350 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.21□□□□□ -1.73
PTPN6P29350 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPN6P29350 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN6P29350 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPN6P29350 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN6P29350 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN6P29350 RAB28P1-201ENST00000411517 641 ntBASIC4.21□□□□□ -1.74
PTPN6P29350 TATDN1P1-201ENST00000414123 891 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms