Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.67□□□□□ -1.66
ABCD3P28288 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ABCD3P28288 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ABCD3P28288 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ABCD3P28288 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.67□□□□□ -1.66
ABCD3P28288 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ABCD3P28288 Z95331.1-201ENST00000623075 23112 ntBASIC4.67□□□□□ -1.66
ABCD3P28288 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ABCD3P28288 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.67□□□□□ -1.66
ABCD3P28288 Z99496.1-201ENST00000469424 1477 ntBASIC4.67□□□□□ -1.66
ABCD3P28288 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ABCD3P28288 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ABCD3P28288 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ABCD3P28288 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ABCD3P28288 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ABCD3P28288 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ABCD3P28288 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ABCD3P28288 MTND5P31-201ENST00000419366 1374 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
ABCD3P28288 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ABCD3P28288 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ABCD3P28288 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ABCD3P28288 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.66□□□□□ -1.66
ABCD3P28288 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.66□□□□□ -1.66
ABCD3P28288 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ABCD3P28288 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ABCD3P28288 RNU6-1066P-201ENST00000363573 105 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 RNU4-92P-201ENST00000363783 136 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 RNU4-4P-201ENST00000364588 130 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.66□□□□□ -1.66
ABCD3P28288 AL078604.1-201ENST00000404609 466 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AL133264.1-201ENST00000407157 562 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 SNORA77-201ENST00000408716 125 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 GJA6P-201ENST00000415117 1042 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AL356320.2-201ENST00000417263 507 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.66□□□□□ -1.66
ABCD3P28288 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.66□□□□□ -1.66
ABCD3P28288 AC008065.1-201ENST00000428525 348 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 IFNNP1-201ENST00000429219 553 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AC084290.1-201ENST00000434995 374 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 NPM1P33-201ENST00000438918 872 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 PTMAP6-201ENST00000439110 327 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AC007327.1-201ENST00000447461 264 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AL034418.1-201ENST00000448675 860 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 NDUFA5P7-201ENST00000452914 242 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 snoU13.7-201ENST00000459220 104 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.66□□□□□ -1.66
ABCD3P28288 RN7SL441P-201ENST00000492388 296 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 RN7SL244P-201ENST00000493405 297 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.66□□□□□ -1.66
ABCD3P28288 AC020699.1-201ENST00000505161 445 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 SNX5P1-201ENST00000505757 1041 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.66□□□□□ -1.66
ABCD3P28288 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ABCD3P28288 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.66□□□□□ -1.66
ABCD3P28288 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ABCD3P28288 NMNAT1P1-201ENST00000554095 876 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 MTCYBP27-201ENST00000555160 670 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.66□□□□□ -1.66
ABCD3P28288 NDUFB4P11-201ENST00000560510 395 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.66□□□□□ -1.66
ABCD3P28288 MIR4691-201ENST00000583764 85 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.66□□□□□ -1.66
ABCD3P28288 AC018695.5-201ENST00000605872 315 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 MIR7155-201ENST00000615925 56 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.66□□□□□ -1.66
ABCD3P28288 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.66□□□□□ -1.66
ABCD3P28288 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.66□□□□□ -1.66
ABCD3P28288 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.66□□□□□ -1.66
ABCD3P28288 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ABCD3P28288 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
ABCD3P28288 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ABCD3P28288 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ABCD3P28288 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.66□□□□□ -1.66
ABCD3P28288 AC000374.1-201ENST00000434698 1745 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AC104623.2-202ENST00000623477 4002 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 AL731566.1-201ENST00000620490 1937 ntBASIC4.66□□□□□ -1.66
ABCD3P28288 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ABCD3P28288 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
ABCD3P28288 AC083843.3-201ENST00000623679 2186 ntBASIC4.65□□□□□ -1.66
ABCD3P28288 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ABCD3P28288 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
ABCD3P28288 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ABCD3P28288 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
ABCD3P28288 AC063976.2-201ENST00000425667 3556 ntBASIC4.65□□□□□ -1.66
ABCD3P28288 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ABCD3P28288 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.65□□□□□ -1.67
ABCD3P28288 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ABCD3P28288 NACA3P-201ENST00000359690 648 ntBASIC4.65□□□□□ -1.67
ABCD3P28288 RNU6-636P-201ENST00000384598 107 ntBASIC4.65□□□□□ -1.67
ABCD3P28288 SNORD65.1-201ENST00000390889 71 ntBASIC4.65□□□□□ -1.67
ABCD3P28288 RNU6-1300P-201ENST00000391046 108 ntBASIC4.65□□□□□ -1.67
ABCD3P28288 AL645927.1-201ENST00000396783 406 ntBASIC4.65□□□□□ -1.67
ABCD3P28288 AL161909.1-201ENST00000397390 712 ntBASIC4.65□□□□□ -1.67
ABCD3P28288 AL078599.1-201ENST00000402075 293 ntBASIC4.65□□□□□ -1.67
ABCD3P28288 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
ABCD3P28288 U3.32-201ENST00000408116 212 ntBASIC4.65□□□□□ -1.67
ABCD3P28288 RNU2-21P-201ENST00000410368 188 ntBASIC4.65□□□□□ -1.67
ABCD3P28288 RPS3AP25-201ENST00000411660 793 ntBASIC4.65□□□□□ -1.67
ABCD3P28288 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms