Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ACTN1P12814 AC010476.1-201ENST00000519111 851 ntBASIC5.05□□□□□ -1.6
ACTN1P12814 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
ACTN1P12814 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
ACTN1P12814 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.05□□□□□ -1.6
ACTN1P12814 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.05□□□□□ -1.6
ACTN1P12814 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.05□□□□□ -1.6
ACTN1P12814 AC144521.1-201ENST00000607148 956 ntBASIC5.05□□□□□ -1.6
ACTN1P12814 AC018926.1-201ENST00000616335 435 ntBASIC5.05□□□□□ -1.6
ACTN1P12814 AP000943.4-201ENST00000622912 357 ntBASIC5.05□□□□□ -1.6
ACTN1P12814 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ACTN1P12814 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.05□□□□□ -1.6
ACTN1P12814 MTCO1P4-201ENST00000520516 1409 ntBASIC5.05□□□□□ -1.6
ACTN1P12814 AL355852.1-201ENST00000454081 1771 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
ACTN1P12814 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN1P12814 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN1P12814 RNU6-452P-201ENST00000384406 107 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 ATP5F1P2-201ENST00000398143 760 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 RPS27AP11-201ENST00000402798 447 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 RPL21P108-201ENST00000413857 481 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.04□□□□□ -1.6
ACTN1P12814 MTCO3P4-201ENST00000419236 787 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.04□□□□□ -1.6
ACTN1P12814 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.04□□□□□ -1.6
ACTN1P12814 EEF1A1P1-201ENST00000447052 739 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.04□□□□□ -1.6
ACTN1P12814 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.04□□□□□ -1.6
ACTN1P12814 UQCRHP4-201ENST00000471686 272 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 RN7SL604P-201ENST00000492589 296 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN1P12814 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.04□□□□□ -1.6
ACTN1P12814 PARP4P3-201ENST00000510265 317 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.04□□□□□ -1.6
ACTN1P12814 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.04□□□□□ -1.6
ACTN1P12814 CYCSP29-201ENST00000533731 318 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 AC006518.1-201ENST00000541449 943 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.04□□□□□ -1.6
ACTN1P12814 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.04□□□□□ -1.6
ACTN1P12814 AC090525.3-201ENST00000605601 189 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 AC015908.5-201ENST00000623289 343 ntBASIC5.04□□□□□ -1.6
ACTN1P12814 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.04□□□□□ -1.6
ACTN1P12814 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN1P12814 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN1P12814 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN1P12814 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN1P12814 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN1P12814 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.04□□□□□ -1.6
ACTN1P12814 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN1P12814 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.03□□□□□ -1.6
ACTN1P12814 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN1P12814 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN1P12814 AC021146.4-201ENST00000309229 279 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 OR56B2P-201ENST00000317102 954 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN1P12814 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.03□□□□□ -1.6
ACTN1P12814 RPL23AP26-201ENST00000412728 464 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 BX664727.1-201ENST00000416024 466 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 PNRC2P1-201ENST00000423940 420 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.03□□□□□ -1.6
ACTN1P12814 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.03□□□□□ -1.6
ACTN1P12814 PHBP16-201ENST00000446318 950 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN1P12814 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.03□□□□□ -1.6
ACTN1P12814 RN7SL98P-201ENST00000462271 300 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN1P12814 CYCSP20-201ENST00000473154 315 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 AC121161.1-201ENST00000510606 652 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.03□□□□□ -1.6
ACTN1P12814 RNU6-1004P-201ENST00000516584 111 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN1P12814 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.03□□□□□ -1.6
ACTN1P12814 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
ACTN1P12814 AC122134.1-202ENST00000569111 1201 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 AC022884.3-201ENST00000579571 248 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 AC012254.4-201ENST00000588843 273 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.03□□□□□ -1.6
ACTN1P12814 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.03□□□□□ -1.6
ACTN1P12814 BNIP3P27-201ENST00000599991 412 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 BNIP3P39-201ENST00000601077 554 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 AL008729.2-201ENST00000606393 473 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 AP005229.2-201ENST00000609980 697 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.03□□□□□ -1.6
ACTN1P12814 RMST_10.1-201ENST00000616309 154 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 AL023881.1-201ENST00000621088 301 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN1P12814 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.03□□□□□ -1.6
ACTN1P12814 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.03□□□□□ -1.6
ACTN1P12814 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN1P12814 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
ACTN1P12814 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ACTN1P12814 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTN1P12814 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ACTN1P12814 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.02□□□□□ -1.61
ACTN1P12814 LINC01109-201ENST00000603837 3081 ntBASIC5.02□□□□□ -1.61
ACTN1P12814 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTN1P12814 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.02□□□□□ -1.61
ACTN1P12814 AC105402.1-201ENST00000413336 545 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms