Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.61□□□□□ -1.51
COL6A2P12110 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.61□□□□□ -1.51
COL6A2P12110 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.61□□□□□ -1.51
COL6A2P12110 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.61□□□□□ -1.51
COL6A2P12110 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
COL6A2P12110 AP001437.1-201ENST00000608783 456 ntBASIC5.61□□□□□ -1.51
COL6A2P12110 uc_338.9-201ENST00000617424 182 ntBASIC5.61□□□□□ -1.51
COL6A2P12110 MIR6778-201ENST00000617912 73 ntBASIC5.61□□□□□ -1.51
COL6A2P12110 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
COL6A2P12110 AL356596.1-201ENST00000624230 379 ntBASIC5.61□□□□□ -1.51
COL6A2P12110 AP001052.1-201ENST00000626421 99 ntBASIC5.61□□□□□ -1.51
COL6A2P12110 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.61□□□□□ -1.51
COL6A2P12110 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL6A2P12110 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL6A2P12110 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL6A2P12110 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
COL6A2P12110 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.6□□□□□ -1.51
COL6A2P12110 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.6□□□□□ -1.51
COL6A2P12110 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.6□□□□□ -1.51
COL6A2P12110 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 SAMMSON-213ENST00000641336 1521 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC114786.1-201ENST00000512892 1415 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 RNU6-462P-201ENST00000362659 105 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.6□□□□□ -1.51
COL6A2P12110 SNORA70.6-201ENST00000383934 134 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 RNU6-272P-201ENST00000411028 104 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.6□□□□□ -1.51
COL6A2P12110 FCF1P2-201ENST00000415284 583 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AL513325.1-201ENST00000417716 1034 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC092634.6-201ENST00000418558 192 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.6□□□□□ -1.51
COL6A2P12110 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.6□□□□□ -1.51
COL6A2P12110 B3GNT2P1-201ENST00000434960 952 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 NDUFB4P8-201ENST00000435351 367 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.6□□□□□ -1.51
COL6A2P12110 AL596266.1-201ENST00000448132 400 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.6□□□□□ -1.51
COL6A2P12110 PPIAP27-201ENST00000453800 265 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.6□□□□□ -1.51
COL6A2P12110 AC023194.2-201ENST00000465398 406 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 RPL21P71-201ENST00000465598 459 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 RPL23AP12-201ENST00000467573 473 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 RN7SL170P-201ENST00000487098 295 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 RN7SL193P-201ENST00000491708 276 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 MYL12BP2-201ENST00000503948 512 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.6□□□□□ -1.51
COL6A2P12110 AC108475.1-201ENST00000507880 950 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC018797.1-201ENST00000510791 255 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 MTCYBP43-201ENST00000513621 740 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 RNA5SP216-201ENST00000516111 123 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 SNORA48.10-201ENST00000516965 160 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 SCARNA6.1-201ENST00000516989 238 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC021678.3-201ENST00000517893 476 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC011853.1-201ENST00000518911 454 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 HMGN2P36-201ENST00000529541 409 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC091489.2-201ENST00000566263 604 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.6□□□□□ -1.51
COL6A2P12110 MIR4660-201ENST00000583549 74 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.6□□□□□ -1.51
COL6A2P12110 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.6□□□□□ -1.51
COL6A2P12110 AP000403.1-201ENST00000603349 851 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC005084.1-201ENST00000605160 304 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 AC006566.1-201ENST00000608943 513 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 AC015726.3-201ENST00000624501 418 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.6□□□□□ -1.51
COL6A2P12110 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
COL6A2P12110 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 MTND5P26-201ENST00000426018 1752 ntBASIC5.6□□□□□ -1.51
COL6A2P12110 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL6A2P12110 AC002525.1-201ENST00000624392 1622 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL6A2P12110 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL6A2P12110 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL6A2P12110 AC027228.2-201ENST00000567141 2154 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 AC079097.1-201ENST00000512187 1399 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.59□□□□□ -1.51
COL6A2P12110 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL6A2P12110 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL6A2P12110 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.59□□□□□ -1.51
COL6A2P12110 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL6A2P12110 RNY4P24-201ENST00000362735 96 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 RNU5E-4P-201ENST00000364931 120 ntBASIC5.59□□□□□ -1.51
COL6A2P12110 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL6A2P12110 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL6A2P12110 RNU6-723P-201ENST00000383973 107 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms