Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AL136295.6-201ENST00000610486 658 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC140479.6-201ENST00000633535 357 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC119674.1-220ENST00000641502 1048 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 Z82217.1-201ENST00000625157 8149 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AL158163.1-201ENST00000603915 1649 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 OR11H4-201ENST00000315409 1082 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 RNA5SP509-201ENST00000364577 119 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC011933.1-201ENST00000413334 321 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AL512504.1-201ENST00000415494 778 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 MFSD13B-201ENST00000420133 1290 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC073143.1-201ENST00000436316 395 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 CASP3P1-201ENST00000446037 609 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC116533.1-201ENST00000459748 321 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 RN7SL271P-201ENST00000487601 295 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 HPRT1P2-201ENST00000505250 544 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC021146.7-201ENST00000509604 775 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 RNA5SP73-201ENST00000516744 108 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 snoU109.6-201ENST00000516831 118 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 MTCYBP19-201ENST00000517463 1124 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 OR4V1P-201ENST00000525394 1140 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 TRAV8-5-201ENST00000537369 341 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC074029.2-201ENST00000551045 634 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC084373.1-201ENST00000603311 235 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AL137072.1-201ENST00000603444 466 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 BX322635.1-201ENST00000605804 496 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AL121890.3-201ENST00000618494 516 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AL023881.1-201ENST00000621088 301 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AP003499.2-201ENST00000624100 483 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC011944.2-201ENST00000624440 683 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 MIR7641-1-201ENST00000627518 61 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AC008013.2-202ENST00000637965 364 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 AL139254.3-201ENST00000641097 674 ntBASIC3.67□□□□□ -1.82
HLA-DPB1P04440 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
HLA-DPB1P04440 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 EIF2AP4-201ENST00000424793 1781 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 MIR708-201ENST00000390708 88 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 RNA5SP36-201ENST00000410197 133 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AMD1P2-201ENST00000412936 992 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AL807761.1-201ENST00000417622 171 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 RNF19BPX-201ENST00000426224 625 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 IFNNP1-201ENST00000429219 553 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 MRPS33P4-201ENST00000434892 317 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AL353898.1-201ENST00000444055 238 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 BTF3L4P4-201ENST00000506381 449 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 FABP5P6-201ENST00000510588 409 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AC067805.1-201ENST00000559344 470 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AC079171.1-201ENST00000568788 914 ntBASIC3.66□□□□□ -1.82
HLA-DPB1P04440 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms