Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 CBX3P5-201ENST00000552017 521 ntBASIC3.5□□□□□ -1.85
HLA-DQB1P01920 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 AC044860.2-201ENST00000561005 179 ntBASIC3.5□□□□□ -1.85
HLA-DQB1P01920 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 AC090312.1-201ENST00000580637 348 ntBASIC3.5□□□□□ -1.85
HLA-DQB1P01920 MIR4270-201ENST00000581799 70 ntBASIC3.5□□□□□ -1.85
HLA-DQB1P01920 AC012417.1-201ENST00000582307 1039 ntBASIC3.5□□□□□ -1.85
HLA-DQB1P01920 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 AL592295.2-201ENST00000612578 206 ntBASIC3.5□□□□□ -1.85
HLA-DQB1P01920 AC090246.1-201ENST00000616499 426 ntBASIC3.5□□□□□ -1.85
HLA-DQB1P01920 AL133370.2-201ENST00000619934 439 ntBASIC3.5□□□□□ -1.85
HLA-DQB1P01920 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB1P01920 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC093719.1-202ENST00000392735 373 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 HLFP1-201ENST00000402375 499 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 HSPE1P8-201ENST00000406997 288 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 RN7SKP235-201ENST00000410662 305 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 MTCYBP7-201ENST00000419540 1134 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AL356387.2-201ENST00000422272 243 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC099336.2-201ENST00000422457 254 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AL356806.1-201ENST00000422524 916 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 RPS26P47-201ENST00000427219 348 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 RPL23AP4-201ENST00000427757 463 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 DNAJC19P1-201ENST00000455312 319 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 RNU6-775P-201ENST00000459318 96 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 APOOP2-201ENST00000461561 539 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC068305.1-201ENST00000497406 726 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 ARL2BPP6-201ENST00000512757 439 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC109635.6-201ENST00000525487 1113 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC113403.1-201ENST00000604910 193 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC034236.3-201ENST00000605999 461 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC012409.3-201ENST00000611343 981 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 AC008121.2-201ENST00000614647 523 ntBASIC3.49□□□□□ -1.85
HLA-DQB1P01920 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
HLA-DQB1P01920 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 RNA5SP36-201ENST00000410197 133 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 USP9YP9-201ENST00000429406 715 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AL353597.2-202ENST00000434901 373 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AC093716.1-201ENST00000435923 377 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 HMGB3P8-201ENST00000449709 577 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 OR2AF1P-201ENST00000454899 889 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AC105233.1-201ENST00000498840 781 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AC020593.1-201ENST00000507399 299 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 KRT19P6-201ENST00000510983 209 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 RN7SKP83-201ENST00000516512 178 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AC067904.2-201ENST00000517322 1283 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 MIR4436B2-201ENST00000581415 91 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 MIR4436B1-201ENST00000583272 91 ntBASIC3.48□□□□□ -1.85
HLA-DQB1P01920 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQB1P01920 AC114878.2-201ENST00000604863 1251 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms