Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TNFP01375 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.84□□□□□ -1.79
TNFP01375 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
TNFP01375 TRAV35-201ENST00000390462 330 ntBASIC3.84□□□□□ -1.79
TNFP01375 LAP3P1-201ENST00000403648 294 ntBASIC3.84□□□□□ -1.79
TNFP01375 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.84□□□□□ -1.79
TNFP01375 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFP01375 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFP01375 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.84□□□□□ -1.79
TNFP01375 DYNLL1P7-201ENST00000429273 258 ntBASIC3.84□□□□□ -1.79
TNFP01375 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.84□□□□□ -1.79
TNFP01375 RANP8-201ENST00000444720 713 ntBASIC3.84□□□□□ -1.79
TNFP01375 PTMAP3-201ENST00000447474 330 ntBASIC3.84□□□□□ -1.79
TNFP01375 AL500522.2-201ENST00000448562 343 ntBASIC3.84□□□□□ -1.79
TNFP01375 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFP01375 RPS20P21-201ENST00000466859 343 ntBASIC3.84□□□□□ -1.79
TNFP01375 PAICSP4-201ENST00000517543 1253 ntBASIC3.84□□□□□ -1.79
TNFP01375 OR5M7P-201ENST00000526140 972 ntBASIC3.84□□□□□ -1.79
TNFP01375 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.84□□□□□ -1.79
TNFP01375 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFP01375 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.84□□□□□ -1.79
TNFP01375 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFP01375 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.84□□□□□ -1.79
TNFP01375 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.84□□□□□ -1.79
TNFP01375 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFP01375 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFP01375 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFP01375 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFP01375 AL669942.2-201ENST00000620352 697 ntBASIC3.84□□□□□ -1.79
TNFP01375 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFP01375 AC095038.2-201ENST00000621464 1070 ntBASIC3.84□□□□□ -1.79
TNFP01375 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.84□□□□□ -1.79
TNFP01375 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TNFP01375 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
TNFP01375 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.84□□□□□ -1.8
TNFP01375 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
TNFP01375 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TNFP01375 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.83□□□□□ -1.8
TNFP01375 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.83□□□□□ -1.8
TNFP01375 AL450992.3-201ENST00000413192 568 ntBASIC3.83□□□□□ -1.8
TNFP01375 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.83□□□□□ -1.8
TNFP01375 AC010740.1-201ENST00000417035 684 ntBASIC3.83□□□□□ -1.8
TNFP01375 MTND2P15-201ENST00000418575 892 ntBASIC3.83□□□□□ -1.8
TNFP01375 TRGV5P-201ENST00000419915 354 ntBASIC3.83□□□□□ -1.8
TNFP01375 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TNFP01375 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.83□□□□□ -1.8
TNFP01375 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.83□□□□□ -1.8
TNFP01375 HMGB1P37-201ENST00000439613 609 ntBASIC3.83□□□□□ -1.8
TNFP01375 VN1R25P-201ENST00000443385 738 ntBASIC3.83□□□□□ -1.8
TNFP01375 NOTCH2P1-201ENST00000443481 624 ntBASIC3.83□□□□□ -1.8
TNFP01375 VN1R34P-201ENST00000447387 883 ntBASIC3.83□□□□□ -1.8
TNFP01375 AL133547.1-201ENST00000448546 220 ntBASIC3.83□□□□□ -1.8
TNFP01375 VN1R40P-201ENST00000455196 941 ntBASIC3.83□□□□□ -1.8
TNFP01375 AC091564.1-201ENST00000464563 479 ntBASIC3.83□□□□□ -1.8
TNFP01375 ACTR3P3-201ENST00000480448 893 ntBASIC3.83□□□□□ -1.8
TNFP01375 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.83□□□□□ -1.8
TNFP01375 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.83□□□□□ -1.8
TNFP01375 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.83□□□□□ -1.8
TNFP01375 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.83□□□□□ -1.8
TNFP01375 AC093853.1-201ENST00000515689 483 ntBASIC3.83□□□□□ -1.8
TNFP01375 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.83□□□□□ -1.8
TNFP01375 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.83□□□□□ -1.8
TNFP01375 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.83□□□□□ -1.8
TNFP01375 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.83□□□□□ -1.8
TNFP01375 AL773545.4-201ENST00000637262 310 ntBASIC3.83□□□□□ -1.8
TNFP01375 AL513478.4-201ENST00000641636 310 ntBASIC3.83□□□□□ -1.8
TNFP01375 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TNFP01375 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
TNFP01375 AC093775.1-201ENST00000624154 1868 ntBASIC3.83□□□□□ -1.8
TNFP01375 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TNFP01375 AL606537.1-201ENST00000607258 2011 ntBASIC3.83□□□□□ -1.8
TNFP01375 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TNFP01375 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TNFP01375 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TNFP01375 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFP01375 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TNFP01375 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.82□□□□□ -1.8
TNFP01375 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TNFP01375 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFP01375 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFP01375 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFP01375 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TNFP01375 MIR670-201ENST00000390142 98 ntBASIC3.82□□□□□ -1.8
TNFP01375 AL160275.2-201ENST00000412010 394 ntBASIC3.82□□□□□ -1.8
TNFP01375 GSTM3P2-201ENST00000412746 530 ntBASIC3.82□□□□□ -1.8
TNFP01375 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
TNFP01375 TRIM60P17-201ENST00000415181 719 ntBASIC3.82□□□□□ -1.8
TNFP01375 EIF4EP1-201ENST00000422311 642 ntBASIC3.82□□□□□ -1.8
TNFP01375 AL389915.1-201ENST00000422463 466 ntBASIC3.82□□□□□ -1.8
TNFP01375 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFP01375 MTCO1P54-201ENST00000430139 712 ntBASIC3.82□□□□□ -1.8
TNFP01375 GOT2P5-201ENST00000433995 546 ntBASIC3.82□□□□□ -1.8
TNFP01375 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFP01375 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFP01375 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.82□□□□□ -1.8
TNFP01375 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFP01375 NDUFB4P12-201ENST00000513465 390 ntBASIC3.82□□□□□ -1.8
TNFP01375 RNU6-352P-201ENST00000516908 107 ntBASIC3.82□□□□□ -1.8
TNFP01375 TRMT10BP1-201ENST00000519377 943 ntBASIC3.82□□□□□ -1.8
TNFP01375 AC087369.1-201ENST00000520775 996 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms