Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL356863.1-201ENST00000623378 1080 ntBASIC4.36□□□□□ -1.71
CLPTM1O96005 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.36□□□□□ -1.71
CLPTM1O96005 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLPTM1O96005 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.36□□□□□ -1.71
CLPTM1O96005 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.36□□□□□ -1.71
CLPTM1O96005 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLPTM1O96005 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLPTM1O96005 SPATA2P1-201ENST00000431223 2055 ntBASIC4.36□□□□□ -1.71
CLPTM1O96005 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLPTM1O96005 KARSP3-201ENST00000571212 1504 ntBASIC4.36□□□□□ -1.71
CLPTM1O96005 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLPTM1O96005 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLPTM1O96005 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLPTM1O96005 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLPTM1O96005 ZNF29P-201ENST00000225587 168 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.35□□□□□ -1.71
CLPTM1O96005 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLPTM1O96005 AP002784.2-201ENST00000397300 549 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.35□□□□□ -1.71
CLPTM1O96005 DDX39BP1-205ENST00000422507 192 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AC073335.1-201ENST00000427776 363 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AC093422.3-201ENST00000428506 305 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 RPL21P91-201ENST00000429231 479 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 CYCSP11-201ENST00000436426 315 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.35□□□□□ -1.71
CLPTM1O96005 MTCYBP12-201ENST00000440559 1134 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 KNOP1P3-201ENST00000446933 426 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 EXOSC3P1-201ENST00000448649 500 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.35□□□□□ -1.71
CLPTM1O96005 RPS20P4-201ENST00000461659 355 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AC018797.3-201ENST00000513388 1241 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 SNORD116-26-201ENST00000516006 96 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 RNU6-276P-201ENST00000516114 96 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.35□□□□□ -1.71
CLPTM1O96005 OR5M7P-201ENST00000526140 972 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.35□□□□□ -1.71
CLPTM1O96005 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AC010735.1-201ENST00000567305 1026 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 MTATP6P24-201ENST00000576835 677 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.35□□□□□ -1.71
CLPTM1O96005 MIR4691-201ENST00000583764 85 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.35□□□□□ -1.71
CLPTM1O96005 RN7SL622P-201ENST00000585292 275 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.35□□□□□ -1.71
CLPTM1O96005 CYCSP41-201ENST00000616920 296 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AC068870.2-201ENST00000620635 389 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AC103858.2-201ENST00000621471 543 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AC019206.1-201ENST00000621938 425 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.35□□□□□ -1.71
CLPTM1O96005 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLPTM1O96005 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.35□□□□□ -1.71
CLPTM1O96005 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLPTM1O96005 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.35□□□□□ -1.71
CLPTM1O96005 AC008758.3-201ENST00000507003 1829 ntBASIC4.35□□□□□ -1.71
CLPTM1O96005 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLPTM1O96005 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.34□□□□□ -1.71
CLPTM1O96005 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CLPTM1O96005 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.34□□□□□ -1.71
CLPTM1O96005 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLPTM1O96005 AC105074.1-201ENST00000623380 3095 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CLPTM1O96005 RN7SKP44-201ENST00000363602 316 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 SNORA58B-201ENST00000364259 136 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CLPTM1O96005 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLPTM1O96005 CHMP1B2P-201ENST00000399581 597 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 AL603865.2-201ENST00000401679 213 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 AL589647.1-201ENST00000402485 466 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 RAC1P3-201ENST00000416129 580 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CLPTM1O96005 RPL23AP4-201ENST00000427757 463 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.34□□□□□ -1.71
CLPTM1O96005 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLPTM1O96005 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLPTM1O96005 MTND1P26-201ENST00000440488 538 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.34□□□□□ -1.71
CLPTM1O96005 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.34□□□□□ -1.71
CLPTM1O96005 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.34□□□□□ -1.71
CLPTM1O96005 AC096741.1-201ENST00000472250 846 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 MTND6P6-201ENST00000478031 263 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 RN7SL244P-201ENST00000493405 297 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 AC114322.1-201ENST00000506771 926 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 RN7SKP141-201ENST00000516167 338 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.34□□□□□ -1.71
CLPTM1O96005 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLPTM1O96005 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.34□□□□□ -1.71
CLPTM1O96005 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.34□□□□□ -1.71
CLPTM1O96005 SMARCE1P4-201ENST00000523647 241 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms