Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 MTND5P25-201ENST00000430499 799 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 BTF3P10-201ENST00000433415 495 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 GTF2IP3-201ENST00000433887 494 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 AL353748.1-201ENST00000440753 474 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 AC092685.1-201ENST00000447960 1243 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 ISCUP1-201ENST00000454451 448 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 OR8I1P-201ENST00000529291 931 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 AC009097.3-201ENST00000563557 1018 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 AC231759.1-201ENST00000616455 597 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 RLIMP1-201ENST00000339626 1680 ntBASIC6.79□□□□□ -1.32
RAPGEF3O95398 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RAPGEF3O95398 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RAPGEF3O95398 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RAPGEF3O95398 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RAPGEF3O95398 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RAPGEF3O95398 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RAPGEF3O95398 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RAPGEF3O95398 MIR513B-201ENST00000385136 84 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AL583835.1-201ENST00000399570 407 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 HMGB1P13-201ENST00000406019 642 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 RPL21P65-201ENST00000406094 466 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 RN7SKP33-201ENST00000410942 340 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 RPS24P7-201ENST00000416921 246 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 MTND4P3-201ENST00000417829 541 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AL449283.1-202ENST00000418249 604 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC114814.2-201ENST00000419195 485 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC023128.2-201ENST00000420880 1223 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 H3F3BP1-201ENST00000440551 403 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 AL133547.1-201ENST00000448546 220 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AL500522.2-201ENST00000448562 343 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 PRPF38AP1-201ENST00000451976 933 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC079203.1-201ENST00000487972 404 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 RPL35P6-201ENST00000490024 372 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 RNA5SP303-201ENST00000516192 130 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC023824.3-201ENST00000569003 562 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC025857.2-201ENST00000602711 238 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 IGKV2OR2-2-201ENST00000605025 300 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 MIR6891-201ENST00000618788 93 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC022079.1-201ENST00000621546 602 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AP003485.2-201ENST00000623636 610 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 AC024023.1-201ENST00000624530 922 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 PROS2P-201ENST00000474651 1951 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RAPGEF3O95398 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RAPGEF3O95398 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
RAPGEF3O95398 CDC27P2-201ENST00000425026 1922 ntBASIC6.78□□□□□ -1.32
RAPGEF3O95398 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
RAPGEF3O95398 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.77□□□□□ -1.32
RAPGEF3O95398 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
RAPGEF3O95398 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
RAPGEF3O95398 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.77□□□□□ -1.33
RAPGEF3O95398 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RAPGEF3O95398 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
RAPGEF3O95398 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RAPGEF3O95398 RNA5SP124-201ENST00000362739 110 ntBASIC6.77□□□□□ -1.33
RAPGEF3O95398 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RAPGEF3O95398 RNU2-22P-201ENST00000411266 212 ntBASIC6.77□□□□□ -1.33
RAPGEF3O95398 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC6.77□□□□□ -1.33
RAPGEF3O95398 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.77□□□□□ -1.33
RAPGEF3O95398 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.77□□□□□ -1.33
RAPGEF3O95398 KRR1P1-201ENST00000419430 803 ntBASIC6.77□□□□□ -1.33
RAPGEF3O95398 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.77□□□□□ -1.33
RAPGEF3O95398 RPL7P34-201ENST00000433316 712 ntBASIC6.77□□□□□ -1.33
RAPGEF3O95398 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RAPGEF3O95398 HSFY3P-201ENST00000444242 1191 ntBASIC6.77□□□□□ -1.33
RAPGEF3O95398 NAP1L1P3-201ENST00000462291 880 ntBASIC6.77□□□□□ -1.33
RAPGEF3O95398 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.77□□□□□ -1.33
RAPGEF3O95398 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.77□□□□□ -1.33
RAPGEF3O95398 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.77□□□□□ -1.33
RAPGEF3O95398 FTH1P21-201ENST00000512179 511 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms