Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN3O15551 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CLDN3O15551 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN3O15551 SNORA27.3-201ENST00000364937 134 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 SNORA70C-201ENST00000384538 135 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 RPS26P8-201ENST00000393490 348 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 ATP5F1P2-201ENST00000398143 760 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AL589655.1-201ENST00000405398 482 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN3O15551 CYCSP10-201ENST00000417973 294 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 EIF4EP1-201ENST00000422311 642 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AC009965.2-201ENST00000425328 970 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 NPM1P24-201ENST00000428039 894 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN3O15551 DYNLL1P7-201ENST00000429273 258 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 RPL23AP46-201ENST00000438548 490 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.6□□□□□ -1.67
CLDN3O15551 RSL24D1P2-201ENST00000445584 366 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN3O15551 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN3O15551 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN3O15551 EIF2S2P5-201ENST00000457635 968 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CLDN3O15551 RPS27AP13-201ENST00000498403 237 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AC108145.1-201ENST00000503770 153 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 BNIP3P41-201ENST00000503774 571 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AC108157.1-201ENST00000510511 539 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AC105233.3-201ENST00000531125 744 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.6□□□□□ -1.67
CLDN3O15551 AC025884.1-201ENST00000556034 378 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AC110743.1-201ENST00000584870 478 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN3O15551 MIR6798-201ENST00000612887 67 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AC016911.1-201ENST00000613297 452 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AC011472.4-201ENST00000615848 491 ntBASIC4.6□□□□□ -1.67
CLDN3O15551 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN3O15551 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN3O15551 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN3O15551 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN3O15551 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CLDN3O15551 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN3O15551 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CLDN3O15551 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CLDN3O15551 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CLDN3O15551 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN3O15551 AC083799.1-201ENST00000366451 910 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN3O15551 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CLDN3O15551 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN3O15551 AC136624.1-201ENST00000400791 413 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 RPS27AP11-201ENST00000402798 447 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 RPS23P10-201ENST00000416185 486 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CLDN3O15551 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN3O15551 COX6CP15-201ENST00000426313 211 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 AC239809.1-201ENST00000450470 217 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN3O15551 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN3O15551 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN3O15551 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN3O15551 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN3O15551 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN3O15551 AC113430.1-201ENST00000506872 718 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN3O15551 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.59□□□□□ -1.67
CLDN3O15551 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN3O15551 AC027176.2-201ENST00000559166 746 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN3O15551 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN3O15551 AC006116.5-201ENST00000591936 559 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 AC017002.4-201ENST00000604721 1525 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN3O15551 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN3O15551 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN3O15551 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN3O15551 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN3O15551 AC007342.8-201ENST00000623278 678 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 AC105074.1-201ENST00000623380 3095 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 AC096656.1-201ENST00000623826 1364 ntBASIC4.59□□□□□ -1.67
CLDN3O15551 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN3O15551 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN3O15551 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CLDN3O15551 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN3O15551 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN3O15551 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN3O15551 AL121657.1-201ENST00000327215 531 ntBASIC4.58□□□□□ -1.68
CLDN3O15551 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN3O15551 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.58□□□□□ -1.68
CLDN3O15551 AC105402.1-201ENST00000413336 545 ntBASIC4.58□□□□□ -1.68
CLDN3O15551 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN3O15551 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN3O15551 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN3O15551 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN3O15551 PRELID3BP10-201ENST00000431957 584 ntBASIC4.58□□□□□ -1.68
CLDN3O15551 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN3O15551 HLA-N-201ENST00000437516 135 ntBASIC4.58□□□□□ -1.68
CLDN3O15551 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN3O15551 RNA5SP246-201ENST00000458909 119 ntBASIC4.58□□□□□ -1.68
CLDN3O15551 RPL7P19-201ENST00000469948 618 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms